Gene info for mRNA_3640 in Rhodosporidium toruloides IFO0880

Name: 12008
Annotation: ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 229,768 to 230,624
See nucleotide sequence around mRNA_3640 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12003 and 12004 are separated by 883 nucleotides12004 and 12005 are separated by 241 nucleotides12005 and 12006 are separated by 812 nucleotides12006 and 12007 are separated by 1201 nucleotides12007 and 12008 are separated by 784 nucleotides12008 and 12009 are separated by 33 nucleotides12009 and 12010 are separated by 264 nucleotides12010 and 12011 are separated by 487 nucleotides12011 and 12012 are separated by 1327 nucleotides12012 and 12013 are separated by 990 nucleotides mRNA_3635: 12003 - BLAST similar to An07g01410 [Aspergillus kawachii IFO 4308], at 215,730 to 216,270 12003 mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217,154 to 218,587 12004 mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218,829 to 220,926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221,739 to 224,481 12006 mRNA_3639: 12007 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 225,683 to 228,983 12007 mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229,768 to 230,624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230,658 to 231,997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232,262 to 233,977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234,465 to 241,327 12011 mRNA_3644: 12012 - Hypothetical Protein, at 242,655 to 243,950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244,941 to 247,626 12013
Locus Name Description Strand Phenotype
mRNA_3635 12003 BLAST similar to An07g01410 [Aspergillus kawachii IFO 4308] + cofit
mRNA_3636 12004 K03238 EIF2S2 translation initiation factor 2 subunit 2 + no data
mRNA_3637 12005 KOG0730 AAA+-type ATPase - cofit
mRNA_3638 12006 KOG1721 FOG Zn-finger - cofit
mRNA_3639 12007 K11204 GCLC glutamate--cysteine ligase catalytic subunit - cofit
mRNA_3640 12008 ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966 - cofit
mRNA_3641 12009 K17615 PPG1 serine/threonine-protein phosphatase PPG1 + cofit
mRNA_3642 12010 K08818 CDC2L cell division cycle 2-like - no data
mRNA_3643 12011 HMMPfam-Protein of unknown function (DUF1765)-PF08578 - insig.
mRNA_3644 12012 Hypothetical Protein - insig.
mRNA_3645 12013 K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 - no data

Or browse nearby genes

Or see the comparative fitness browser