Gene info for mRNA_3699 in Rhodosporidium toruloides IFO0880

Name: 12067
Annotation: KOG0870 DNA polymerase epsilon, subunit D
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 386,627 to 387,665
See nucleotide sequence around mRNA_3699 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12062 and 12063 are separated by 154 nucleotides12063 and 12064 are separated by 358 nucleotides12064 and 12065 are separated by 274 nucleotides12065 and 12066 are separated by 256 nucleotides12066 and 12067 are separated by 151 nucleotides12067 and 12068 are separated by 278 nucleotides12068 and 12069 are separated by 348 nucleotides12069 and 12070 are separated by 351 nucleotides12070 and 12071 are separated by 230 nucleotides12071 and 12072 are separated by 257 nucleotides mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376,601 to 378,918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379,073 to 379,916 12063 mRNA_3696: 12064 - SUPERFAMILY--SSF53335, at 380,275 to 383,085 12064 mRNA_3697: 12065 - K04371 MAPK1_3 mitogen-activated protein kinase 1/3, at 383,360 to 385,326 12065 mRNA_3698: 12066 - K10428 DCTN6 dynactin 6, at 385,583 to 386,475 12066 mRNA_3699: 12067 - KOG0870 DNA polymerase epsilon, subunit D, at 386,627 to 387,665 12067 mRNA_3700: 12068 - K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2, at 387,944 to 388,740 12068 mRNA_3701: 12069 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 389,089 to 390,202 12069 mRNA_3702: 12070 - HMMPfam-Inner centromere protein, ARK binding region-PF03941, at 390,554 to 394,764 12070 mRNA_3703: 12071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 394,995 to 398,800 12071 mRNA_3704: 12072 - Hypothetical Protein, at 399,058 to 399,573 12072
Locus Name Description Strand Phenotype
mRNA_3694 12062 K18334 fucD L-fuconate dehydratase + insig.
mRNA_3695 12063 KOG1730 Thioredoxin-like protein - cofit
mRNA_3696 12064 SUPERFAMILY--SSF53335 + cofit
mRNA_3697 12065 K04371 MAPK1_3 mitogen-activated protein kinase 1/3 - no data
mRNA_3698 12066 K10428 DCTN6 dynactin 6 + no data
mRNA_3699 12067 KOG0870 DNA polymerase epsilon, subunit D - cofit
mRNA_3700 12068 K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 - cofit
mRNA_3701 12069 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 + cofit
mRNA_3702 12070 HMMPfam-Inner centromere protein, ARK binding region-PF03941 + no data
mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_3704 12072 Hypothetical Protein - no data

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