Gene info for mRNA_3705 in Rhodosporidium toruloides IFO0880

Name: 12073
Annotation: Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 399,729 to 400,196
See nucleotide sequence around mRNA_3705 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12068 and 12069 are separated by 348 nucleotides12069 and 12070 are separated by 351 nucleotides12070 and 12071 are separated by 230 nucleotides12071 and 12072 are separated by 257 nucleotides12072 and 12073 are separated by 155 nucleotides12073 and 12074 overlap by 11 nucleotides12074 and 12075 are separated by 626 nucleotides12075 and 12076 are separated by 327 nucleotides12076 and 12077 are separated by 303 nucleotides12077 and 12078 are separated by 247 nucleotides mRNA_3700: 12068 - K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2, at 387,944 to 388,740 12068 mRNA_3701: 12069 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 389,089 to 390,202 12069 mRNA_3702: 12070 - HMMPfam-Inner centromere protein, ARK binding region-PF03941, at 390,554 to 394,764 12070 mRNA_3703: 12071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 394,995 to 398,800 12071 mRNA_3704: 12072 - Hypothetical Protein, at 399,058 to 399,573 12072 mRNA_3705: 12073 - Hypothetical Protein, at 399,729 to 400,196 12073 mRNA_3706: 12074 - KOG1550 Extracellular protein SEL-1 and related proteins, at 400,186 to 402,852 12074 mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403,479 to 405,078 12075 mRNA_3708: 12076 - Hypothetical Protein, at 405,406 to 406,282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406,586 to 407,790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078
Locus Name Description Strand Phenotype
mRNA_3700 12068 K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 - cofit
mRNA_3701 12069 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 + cofit
mRNA_3702 12070 HMMPfam-Inner centromere protein, ARK binding region-PF03941 + no data
mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_3704 12072 Hypothetical Protein - no data
mRNA_3705 12073 Hypothetical Protein + cofit
mRNA_3706 12074 KOG1550 Extracellular protein SEL-1 and related proteins - cofit
mRNA_3707 12075 KOG2846 Predicted membrane protein - no data
mRNA_3708 12076 Hypothetical Protein + cofit
mRNA_3709 12077 SUPERFAMILY--SSF52540 + insig.
mRNA_3710 12078 KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase - no data

Or browse nearby genes

Or see the comparative fitness browser