Gene info for mRNA_3745 in Rhodosporidium toruloides IFO0880

Name: 12113
Annotation: BLAST protein of unknown function [Taphrina deformans PYCC ...
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 486,209 to 486,880
See nucleotide sequence around mRNA_3745 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12108 and 12109 overlap by 8 nucleotides12109 and 12110 are separated by 566 nucleotides12110 and 12111 are separated by 310 nucleotides12111 and 12112 are separated by 1046 nucleotides12112 and 12113 are separated by 241 nucleotides12113 and 12114 are separated by 246 nucleotides12114 and 12115 are separated by 749 nucleotides12115 and 12116 are separated by 808 nucleotides12116 and 12117 are separated by 377 nucleotides12117 and 12118 are separated by 84 nucleotides mRNA_3740: 12108 - Hypothetical Protein, at 469,899 to 470,347 12108 mRNA_3741: 12109 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 470,340 to 473,925 12109 mRNA_3742: 12110 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 474,492 to 476,469 12110 mRNA_3743: 12111 - K15289 SLC35F5 solute carrier family 35, member F5, at 476,780 to 478,513 12111 mRNA_3744: 12112 - KOG0955 PHD finger protein BR140/LIN-49, at 479,560 to 485,967 12112 mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486,209 to 486,880 12113 mRNA_3746: 12114 - Hypothetical Protein, at 487,127 to 488,004 12114 mRNA_3747: 12115 - Hypothetical Protein, at 488,754 to 489,655 12115 mRNA_3748: 12116 - K00658 DLST, sucB 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), at 490,464 to 492,382 12116 mRNA_3749: 12117 - HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850, at 492,760 to 497,695 12117 mRNA_3750: 12118 - K13421 UMPS uridine monophosphate synthetase, at 497,780 to 498,794 12118
Locus Name Description Strand Phenotype
mRNA_3740 12108 Hypothetical Protein + cofit
mRNA_3741 12109 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_3742 12110 SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126 + cofit
mRNA_3743 12111 K15289 SLC35F5 solute carrier family 35, member F5 - cofit
mRNA_3744 12112 KOG0955 PHD finger protein BR140/LIN-49 + cofit
mRNA_3745 12113 BLAST protein of unknown function [Taphrina deformans PYCC ... - cofit
mRNA_3746 12114 Hypothetical Protein + cofit
mRNA_3747 12115 Hypothetical Protein + insig.
mRNA_3748 12116 K00658 DLST, sucB 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) - no data
mRNA_3749 12117 HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850 + cofit
mRNA_3750 12118 K13421 UMPS uridine monophosphate synthetase - no data

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