Gene info for mRNA_3778 in Rhodosporidium toruloides IFO0880

Name: 12146
Annotation: HMMPfam-Endonuclease V-PF04493
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 558,485 to 559,797
See nucleotide sequence around mRNA_3778 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12141 and 12142 are separated by 1622 nucleotides12142 and 12143 are separated by 663 nucleotides12143 and 12144 are separated by 292 nucleotides12144 and 12145 are separated by 605 nucleotides12145 and 12146 are separated by 450 nucleotides12146 and 12147 are separated by 774 nucleotides12147 and 12148 are separated by 246 nucleotides12148 and 12149 are separated by 1587 nucleotides12149 and 12150 are separated by 353 nucleotides12150 and 12151 are separated by 926 nucleotides mRNA_3773: 12141 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 547,802 to 549,606 12141 mRNA_3774: 12142 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 551,229 to 552,274 12142 mRNA_3775: 12143 - KOG2913 Predicted membrane protein, at 552,938 to 553,662 12143 mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553,955 to 556,574 12144 mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557,180 to 558,034 12145 mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558,485 to 559,797 12146 mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560,572 to 561,347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561,594 to 563,970 12148 mRNA_3781: 12149 - K12821 PRPF40, PRP40 pre-mRNA-processing factor 40, at 565,558 to 568,249 12149 mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568,603 to 571,218 12150 mRNA_3783: 12151 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 572,145 to 573,439 12151
Locus Name Description Strand Phenotype
mRNA_3773 12141 BLAST transmembrane protein, putative [Rhizoctonia solani A... - cofit
mRNA_3774 12142 K01764 E4.4.1.17 cytochrome c heme-lyase - no data
mRNA_3775 12143 KOG2913 Predicted membrane protein + insig.
mRNA_3776 12144 HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850 - sig.
mRNA_3777 12145 K20346 TMED4_9_11 p24 family protein alpha - cofit
mRNA_3778 12146 HMMPfam-Endonuclease V-PF04493 + cofit
mRNA_3779 12147 HMMPfam-Spc19-PF08287 + no data
mRNA_3780 12148 KOG1426 FOG RCC1 domain + cofit
mRNA_3781 12149 K12821 PRPF40, PRP40 pre-mRNA-processing factor 40 - cofit
mRNA_3782 12150 K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B + no data
mRNA_3783 12151 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase + cofit

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