Gene info for mRNA_3848 in Rhodosporidium toruloides IFO0880

Name: 12216
Annotation: KOG1817 Ribonuclease
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 733,873 to 734,892
See nucleotide sequence around mRNA_3848 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12211 and 12212 are separated by 115 nucleotides12212 and 12213 are separated by 472 nucleotides12213 and 12214 are separated by 988 nucleotides12214 and 12215 are separated by 1804 nucleotides12215 and 12216 are separated by 513 nucleotides12216 and 12217 are separated by 360 nucleotides12217 and 12218 are separated by 2497 nucleotides12218 and 12219 are separated by 547 nucleotides12219 and 12220 are separated by 273 nucleotides12220 and 12221 are separated by 678 nucleotides mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719,514 to 723,213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723,329 to 725,612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726,085 to 727,619 12213 mRNA_3846: 12214 - HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667, at 728,608 to 730,842 12214 mRNA_3847: 12215 - Hypothetical Protein, at 732,647 to 733,359 12215 mRNA_3848: 12216 - KOG1817 Ribonuclease, at 733,873 to 734,892 12216 mRNA_3849: 12217 - Hypothetical Protein, at 735,253 to 736,177 12217 mRNA_3850: 12218 - BLAST Protein kinase-like domain protein [Cordyceps confrag..., at 738,675 to 741,507 12218 mRNA_3851: 12219 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 742,055 to 744,016 12219 mRNA_3852: 12220 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 744,290 to 745,525 12220 mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746,204 to 748,742 12221
Locus Name Description Strand Phenotype
mRNA_3843 12211 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 + cofit
mRNA_3844 12212 HMMPfam-Afadin- and alpha -actinin-Binding-PF11559 - cofit
mRNA_3845 12213 HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335 - insig.
mRNA_3846 12214 HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667 - insig.
mRNA_3847 12215 Hypothetical Protein - no data
mRNA_3848 12216 KOG1817 Ribonuclease + cofit
mRNA_3849 12217 Hypothetical Protein + cofit
mRNA_3850 12218 BLAST Protein kinase-like domain protein [Cordyceps confrag... - cofit
mRNA_3851 12219 HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473 - insig.
mRNA_3852 12220 HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833 - insig.
mRNA_3853 12221 K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other - cofit

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