Gene info for mRNA_3858 in Rhodosporidium toruloides IFO0880

Name: 12226
Annotation: K17890 ATG16L1 autophagy-related protein 16-1
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 757,885 to 761,783
See nucleotide sequence around mRNA_3858 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12221 and 12222 are separated by 747 nucleotides12222 and 12223 are separated by 272 nucleotides12223 and 12224 are separated by 151 nucleotides12224 and 12225 are separated by 162 nucleotides12225 and 12226 are separated by 602 nucleotides12226 and 12227 are separated by 298 nucleotides12227 and 12228 are separated by 359 nucleotides12228 and 12229 are separated by 454 nucleotides12229 and 12230 are separated by 217 nucleotides12230 and 12231 are separated by 501 nucleotides mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746,204 to 748,742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749,490 to 750,342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750,615 to 752,769 12223 mRNA_3856: 12224 - Hypothetical Protein, at 752,921 to 753,919 12224 mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754,082 to 757,282 12225 mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757,885 to 761,783 12226 mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762,082 to 763,041 12227 mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763,401 to 765,833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766,288 to 767,441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767,659 to 769,319 12230 mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769,821 to 771,118 12231
Locus Name Description Strand Phenotype
mRNA_3853 12221 K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other - cofit
mRNA_3854 12222 Hypothetical Protein + cofit
mRNA_3855 12223 SUPERFAMILY--SSF52047 - cofit
mRNA_3856 12224 Hypothetical Protein + insig.
mRNA_3857 12225 Interpro Mysoin-binding motif of peroxisomes - cofit
mRNA_3858 12226 K17890 ATG16L1 autophagy-related protein 16-1 + cofit
mRNA_3859 12227 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3860 12228 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3861 12229 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3862 12230 SUPERFAMILY--SSF52047 - cofit
mRNA_3863 12231 KOG1434 Meiotic recombination protein Dmc1 + no data

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