Gene info for mRNA_3862 in Rhodosporidium toruloides IFO0880

Name: 12230
Annotation: SUPERFAMILY--SSF52047
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 767,659 to 769,319
See nucleotide sequence around mRNA_3862 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12225 and 12226 are separated by 602 nucleotides12226 and 12227 are separated by 298 nucleotides12227 and 12228 are separated by 359 nucleotides12228 and 12229 are separated by 454 nucleotides12229 and 12230 are separated by 217 nucleotides12230 and 12231 are separated by 501 nucleotides12231 and 12232 are separated by 305 nucleotides12232 and 12233 are separated by 1356 nucleotides12233 and 12234 are separated by 1688 nucleotides12234 and 12235 are separated by 1159 nucleotides mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754,082 to 757,282 12225 mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757,885 to 761,783 12226 mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762,082 to 763,041 12227 mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763,401 to 765,833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766,288 to 767,441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767,659 to 769,319 12230 mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769,821 to 771,118 12231 mRNA_3864: 12232 - K08737 MSH6 DNA mismatch repair protein MSH6, at 771,424 to 775,679 12232 mRNA_3865: 12233 - HMMPfam-DASH complex subunit Spc34-PF08657, at 777,036 to 778,951 12233 mRNA_3866: 12234 - Hypothetical Protein, at 780,640 to 781,665 12234 mRNA_3867: 12235 - KOG1812 Predicted E3 ubiquitin ligase, at 782,825 to 783,717 12235
Locus Name Description Strand Phenotype
mRNA_3857 12225 Interpro Mysoin-binding motif of peroxisomes - cofit
mRNA_3858 12226 K17890 ATG16L1 autophagy-related protein 16-1 + cofit
mRNA_3859 12227 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3860 12228 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3861 12229 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit
mRNA_3862 12230 SUPERFAMILY--SSF52047 - cofit
mRNA_3863 12231 KOG1434 Meiotic recombination protein Dmc1 + no data
mRNA_3864 12232 K08737 MSH6 DNA mismatch repair protein MSH6 - insig.
mRNA_3865 12233 HMMPfam-DASH complex subunit Spc34-PF08657 - cofit
mRNA_3866 12234 Hypothetical Protein + no data
mRNA_3867 12235 KOG1812 Predicted E3 ubiquitin ligase + insig.

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