Gene info for mRNA_3867 in Rhodosporidium toruloides IFO0880

Name: 12235
Annotation: KOG1812 Predicted E3 ubiquitin ligase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 782,825 to 783,717
See nucleotide sequence around mRNA_3867 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12230 and 12231 are separated by 501 nucleotides12231 and 12232 are separated by 305 nucleotides12232 and 12233 are separated by 1356 nucleotides12233 and 12234 are separated by 1688 nucleotides12234 and 12235 are separated by 1159 nucleotides12235 and 12236 are separated by 254 nucleotides12236 and 12237 are separated by 208 nucleotides12237 and 12238 are separated by 293 nucleotides12238 and 12239 are separated by 304 nucleotides12239 and 12240 are separated by 925 nucleotides mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767,659 to 769,319 12230 mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769,821 to 771,118 12231 mRNA_3864: 12232 - K08737 MSH6 DNA mismatch repair protein MSH6, at 771,424 to 775,679 12232 mRNA_3865: 12233 - HMMPfam-DASH complex subunit Spc34-PF08657, at 777,036 to 778,951 12233 mRNA_3866: 12234 - Hypothetical Protein, at 780,640 to 781,665 12234 mRNA_3867: 12235 - KOG1812 Predicted E3 ubiquitin ligase, at 782,825 to 783,717 12235 mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783,972 to 787,068 12236 mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787,277 to 789,620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789,914 to 792,634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792,939 to 793,930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240
Locus Name Description Strand Phenotype
mRNA_3862 12230 SUPERFAMILY--SSF52047 - cofit
mRNA_3863 12231 KOG1434 Meiotic recombination protein Dmc1 + no data
mRNA_3864 12232 K08737 MSH6 DNA mismatch repair protein MSH6 - insig.
mRNA_3865 12233 HMMPfam-DASH complex subunit Spc34-PF08657 - cofit
mRNA_3866 12234 Hypothetical Protein + no data
mRNA_3867 12235 KOG1812 Predicted E3 ubiquitin ligase + insig.
mRNA_3868 12236 KOG0603 Ribosomal protein S6 kinase + cofit
mRNA_3869 12237 KOG3207 Beta-tubulin folding cofactor E - cofit
mRNA_3870 12238 HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448 - cofit
mRNA_3871 12239 K10295 FBXO9 F-box protein 9 - insig.
mRNA_3872 12240 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily + cofit

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