Gene info for mRNA_3914 in Rhodosporidium toruloides IFO0880

Name: 12282
Annotation: HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 886,816 to 890,417
See nucleotide sequence around mRNA_3914 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12277 and 12278 are separated by 790 nucleotides12278 and 12279 are separated by 327 nucleotides12279 and 12280 are separated by 147 nucleotides12280 and 12281 are separated by 209 nucleotides12281 and 12282 are separated by 290 nucleotides12282 and 12283 are separated by 222 nucleotides12283 and 12284 are separated by 124 nucleotides12284 and 12285 are separated by 144 nucleotides12285 and 12286 are separated by 591 nucleotides12286 and 12287 are separated by 518 nucleotides mRNA_3909: 12277 - K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1, at 872,113 to 873,418 12277 mRNA_3910: 12278 - KOG0587 Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases, at 874,209 to 878,555 12278 mRNA_3911: 12279 - K18655 DDX19, DBP5 ATP-dependent RNA helicase DDX19/DBP5, at 878,883 to 880,998 12279 mRNA_3912: 12280 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 881,146 to 884,820 12280 mRNA_3913: 12281 - SUPERFAMILY--SSF48452, at 885,030 to 886,525 12281 mRNA_3914: 12282 - HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350, at 886,816 to 890,417 12282 mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890,640 to 892,402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892,527 to 893,886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894,031 to 894,594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895,186 to 897,368 12286 mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897,887 to 899,209 12287
Locus Name Description Strand Phenotype
mRNA_3909 12277 K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1 - cofit
mRNA_3910 12278 KOG0587 Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases - cofit
mRNA_3911 12279 K18655 DDX19, DBP5 ATP-dependent RNA helicase DDX19/DBP5 - no data
mRNA_3912 12280 HMMPfam-Protein of unknown function (DUF2422)-PF10337 + cofit
mRNA_3913 12281 SUPERFAMILY--SSF48452 + no data
mRNA_3914 12282 HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350 + cofit
mRNA_3915 12283 K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase - insig.
mRNA_3916 12284 K02736 PSMB4 20S proteasome subunit beta 7 + no data
mRNA_3917 12285 KOG4479 Transcription factor e(y)2 - cofit
mRNA_3918 12286 KOG0024 Sorbitol dehydrogenase - cofit
mRNA_3919 12287 KOG4020 Protein DRE2, required for cell viability - no data

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