Gene info for mRNA_3918 in Rhodosporidium toruloides IFO0880

Name: 12286
Annotation: KOG0024 Sorbitol dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 895,186 to 897,368
See nucleotide sequence around mRNA_3918 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12281 and 12282 are separated by 290 nucleotides12282 and 12283 are separated by 222 nucleotides12283 and 12284 are separated by 124 nucleotides12284 and 12285 are separated by 144 nucleotides12285 and 12286 are separated by 591 nucleotides12286 and 12287 are separated by 518 nucleotides12287 and 12288 are separated by 330 nucleotides12288 and 12289 are separated by 1294 nucleotides12289 and 12290 are separated by 442 nucleotides12290 and 12291 are separated by 282 nucleotides mRNA_3913: 12281 - SUPERFAMILY--SSF48452, at 885,030 to 886,525 12281 mRNA_3914: 12282 - HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350, at 886,816 to 890,417 12282 mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890,640 to 892,402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892,527 to 893,886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894,031 to 894,594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895,186 to 897,368 12286 mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897,887 to 899,209 12287 mRNA_3920: 12288 - K12767 RIM15 serine/threonine-protein kinase RIM15, at 899,540 to 908,734 12288 mRNA_3921: 12289 - Hypothetical Protein, at 910,029 to 911,741 12289 mRNA_3922: 12290 - K11099 SNRPG, SMG small nuclear ribonucleoprotein G, at 912,184 to 912,720 12290 mRNA_3923: 12291 - K01465 URA4, pyrC dihydroorotase, at 913,003 to 914,315 12291
Locus Name Description Strand Phenotype
mRNA_3913 12281 SUPERFAMILY--SSF48452 + no data
mRNA_3914 12282 HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350 + cofit
mRNA_3915 12283 K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase - insig.
mRNA_3916 12284 K02736 PSMB4 20S proteasome subunit beta 7 + no data
mRNA_3917 12285 KOG4479 Transcription factor e(y)2 - cofit
mRNA_3918 12286 KOG0024 Sorbitol dehydrogenase - cofit
mRNA_3919 12287 KOG4020 Protein DRE2, required for cell viability - no data
mRNA_3920 12288 K12767 RIM15 serine/threonine-protein kinase RIM15 - cofit
mRNA_3921 12289 Hypothetical Protein - cofit
mRNA_3922 12290 K11099 SNRPG, SMG small nuclear ribonucleoprotein G + no data
mRNA_3923 12291 K01465 URA4, pyrC dihydroorotase - no data

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