Gene info for mRNA_3940 in Rhodosporidium toruloides IFO0880

Name: 12308
Annotation: KOG3162 Mitochondrial/chloroplast ribosomal protein S18
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 952,149 to 952,942
See nucleotide sequence around mRNA_3940 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12303 and 12304 are separated by 464 nucleotides12304 and 12305 are separated by 151 nucleotides12305 and 12306 are separated by 167 nucleotides12306 and 12307 are separated by 334 nucleotides12307 and 12308 are separated by 429 nucleotides12308 and 12309 are separated by 168 nucleotides12309 and 12310 are separated by 374 nucleotides12310 and 12311 are separated by 134 nucleotides12311 and 12312 are separated by 441 nucleotides12312 and 12313 are separated by 329 nucleotides mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944,779 to 945,196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945,661 to 946,219 12304 mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946,371 to 947,832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311 mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312 mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963,699 to 967,662 12313
Locus Name Description Strand Phenotype
mRNA_3935 12303 HMMPfam-ER protein Pkr1-PF08636 - insig.
mRNA_3936 12304 Hypothetical Protein + cofit
mRNA_3937 12305 KOG0692 Pentafunctional AROM protein - cofit
mRNA_3938 12306 HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482 - cofit
mRNA_3939 12307 K13954 yiaY alcohol dehydrogenase + cofit
mRNA_3940 12308 KOG3162 Mitochondrial/chloroplast ribosomal protein S18 + no data
mRNA_3941 12309 Hypothetical Protein - no data
mRNA_3942 12310 K20298 VPS52 vacuolar protein sorting-associated protein 52 - cofit
mRNA_3943 12311 K10843 ERCC3, XPB DNA excision repair protein ERCC-3 + no data
mRNA_3944 12312 BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba... + cofit
mRNA_3945 12313 HMMPfam-Protein of unknown function (DUF2422)-PF10337 + insig.

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