Gene info for mRNA_3943 in Rhodosporidium toruloides IFO0880

Name: 12311
Annotation: K10843 ERCC3, XPB DNA excision repair protein ERCC-3
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 957,047 to 960,564
See nucleotide sequence around mRNA_3943 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12306 and 12307 are separated by 334 nucleotides12307 and 12308 are separated by 429 nucleotides12308 and 12309 are separated by 168 nucleotides12309 and 12310 are separated by 374 nucleotides12310 and 12311 are separated by 134 nucleotides12311 and 12312 are separated by 441 nucleotides12312 and 12313 are separated by 329 nucleotides12313 and 12314 are separated by 213 nucleotides12314 and 12315 are separated by 123 nucleotides12315 and 12316 are separated by 119 nucleotides mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948,000 to 949,684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950,019 to 951,719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952,149 to 952,942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311 mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312 mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963,699 to 967,662 12313 mRNA_3946: 12314 - K06176 truD, PUS7 tRNA pseudouridine13 synthase, at 967,876 to 970,743 12314 mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970,867 to 972,281 12315 mRNA_3948: 12316 - Hypothetical Protein, at 972,401 to 974,517 12316
Locus Name Description Strand Phenotype
mRNA_3938 12306 HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482 - cofit
mRNA_3939 12307 K13954 yiaY alcohol dehydrogenase + cofit
mRNA_3940 12308 KOG3162 Mitochondrial/chloroplast ribosomal protein S18 + no data
mRNA_3941 12309 Hypothetical Protein - no data
mRNA_3942 12310 K20298 VPS52 vacuolar protein sorting-associated protein 52 - cofit
mRNA_3943 12311 K10843 ERCC3, XPB DNA excision repair protein ERCC-3 + no data
mRNA_3944 12312 BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba... + cofit
mRNA_3945 12313 HMMPfam-Protein of unknown function (DUF2422)-PF10337 + insig.
mRNA_3946 12314 K06176 truD, PUS7 tRNA pseudouridine13 synthase - strong
mRNA_3947 12315 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase + cofit
mRNA_3948 12316 Hypothetical Protein - cofit

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