Gene info for mRNA_3946 in Rhodosporidium toruloides IFO0880

Name: 12314
Annotation: K06176 truD, PUS7 tRNA pseudouridine13 synthase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 967,876 to 970,743
See nucleotide sequence around mRNA_3946 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12309 and 12310 are separated by 374 nucleotides12310 and 12311 are separated by 134 nucleotides12311 and 12312 are separated by 441 nucleotides12312 and 12313 are separated by 329 nucleotides12313 and 12314 are separated by 213 nucleotides12314 and 12315 are separated by 123 nucleotides12315 and 12316 are separated by 119 nucleotides12316 and 12317 are separated by 434 nucleotides12317 and 12318 are separated by 360 nucleotides12318 and 12319 are separated by 979 nucleotides mRNA_3941: 12309 - Hypothetical Protein, at 953,111 to 953,710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954,085 to 956,912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957,047 to 960,564 12311 mRNA_3944: 12312 - BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba..., at 961,006 to 963,369 12312 mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963,699 to 967,662 12313 mRNA_3946: 12314 - K06176 truD, PUS7 tRNA pseudouridine13 synthase, at 967,876 to 970,743 12314 mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970,867 to 972,281 12315 mRNA_3948: 12316 - Hypothetical Protein, at 972,401 to 974,517 12316 mRNA_3949: 12317 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 974,952 to 977,086 12317 mRNA_3950: 12318 - K03456 PPP2R1 serine/threonine-protein phosphatase 2A regulatory subunit A, at 977,447 to 979,479 12318 mRNA_3951: 12319 - K02967 RP-S2, MRPS2, rpsB small subunit ribosomal protein S2, at 980,459 to 981,716 12319
Locus Name Description Strand Phenotype
mRNA_3941 12309 Hypothetical Protein - no data
mRNA_3942 12310 K20298 VPS52 vacuolar protein sorting-associated protein 52 - cofit
mRNA_3943 12311 K10843 ERCC3, XPB DNA excision repair protein ERCC-3 + no data
mRNA_3944 12312 BLAST trna guanine-n1-methyltransferase [Ceraceosorus bomba... + cofit
mRNA_3945 12313 HMMPfam-Protein of unknown function (DUF2422)-PF10337 + insig.
mRNA_3946 12314 K06176 truD, PUS7 tRNA pseudouridine13 synthase - strong
mRNA_3947 12315 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase + cofit
mRNA_3948 12316 Hypothetical Protein - cofit
mRNA_3949 12317 BLAST transmembrane protein, putative [Rhizoctonia solani A... + insig.
mRNA_3950 12318 K03456 PPP2R1 serine/threonine-protein phosphatase 2A regulatory subunit A - no data
mRNA_3951 12319 K02967 RP-S2, MRPS2, rpsB small subunit ribosomal protein S2 + no data

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