Gene info for mRNA_3981 in Rhodosporidium toruloides IFO0880

Name: 12349
Annotation: K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,058,258 to 1,059,791
See nucleotide sequence around mRNA_3981 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12344 and 12345 are separated by 234 nucleotides12345 and 12346 are separated by 133 nucleotides12346 and 12347 are separated by 353 nucleotides12347 and 12348 are separated by 335 nucleotides12348 and 12349 are separated by 293 nucleotides12349 and 12350 are separated by 165 nucleotides12350 and 12351 are separated by 466 nucleotides12351 and 12352 are separated by 1020 nucleotides12352 and 12353 are separated by 727 nucleotides12353 and 12354 are separated by 285 nucleotides mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1,047,076 to 1,050,963 12344 mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1,051,198 to 1,052,896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1,053,030 to 1,054,389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1,054,743 to 1,056,048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1,056,384 to 1,057,964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1,058,258 to 1,059,791 12349 mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1,059,957 to 1,071,266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1,071,733 to 1,072,892 12351 mRNA_3984: 12352 - Hypothetical Protein, at 1,073,913 to 1,075,521 12352 mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1,076,249 to 1,078,580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1,078,866 to 1,080,824 12354
Locus Name Description Strand Phenotype
mRNA_3976 12344 K20473 NBAS neuroblastoma-amplified sequence + no data
mRNA_3977 12345 KOG4689 Predicted RNase + insig.
mRNA_3978 12346 Hypothetical Protein - cofit
mRNA_3979 12347 K07119 K07119 uncharacterized protein + no data
mRNA_3980 12348 KOG1196 Predicted NAD-dependent oxidoreductase + cofit
mRNA_3981 12349 K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5 - cofit
mRNA_3982 12350 K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C - no data
mRNA_3983 12351 HMMPfam-Mpv17 / PMP22 family-PF04117 + cofit
mRNA_3984 12352 Hypothetical Protein - cofit
mRNA_3985 12353 K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter - no data
mRNA_3986 12354 K01439 dapE succinyl-diaminopimelate desuccinylase + cofit

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