Gene info for mRNA_4005 in Rhodosporidium toruloides IFO0880

Name: 12373
Annotation: HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,131,746 to 1,132,749
See nucleotide sequence around mRNA_4005 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12368 and 12369 are separated by 2237 nucleotides12369 and 12370 are separated by 1396 nucleotides12370 and 12371 are separated by 390 nucleotides12371 and 12372 are separated by 831 nucleotides12372 and 12373 are separated by 581 nucleotides12373 and 12374 are separated by 421 nucleotides12374 and 12375 are separated by 251 nucleotides12375 and 12376 are separated by 300 nucleotides12376 and 12377 are separated by 400 nucleotides12377 and 12378 are separated by 616 nucleotides mRNA_4000: 12368 - BLAST Myosin heavy chain, striated muscle [Argopecten irrad..., at 1,116,846 to 1,118,153 12368 mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369 mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1,122,500 to 1,123,489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1,123,880 to 1,126,136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1,126,968 to 1,131,164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,131,746 to 1,132,749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1,133,171 to 1,133,679 12374 mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1,133,931 to 1,136,432 12375 mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1,136,733 to 1,139,810 12376 mRNA_4009: 12377 - K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1, at 1,140,211 to 1,141,922 12377 mRNA_4010: 12378 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,142,539 to 1,145,554 12378
Locus Name Description Strand Phenotype
mRNA_4000 12368 BLAST Myosin heavy chain, striated muscle [Argopecten irrad... - no data
mRNA_4001 12369 Hypothetical Protein - cofit
mRNA_4002 12370 KOG4089 Predicted mitochondrial ribosomal protein L23 - no data
mRNA_4003 12371 K13667 RUMI, KTELC1 protein glucosyltransferase + cofit
mRNA_4004 12372 KOG1341 Na+/K+ transporter + strong
mRNA_4005 12373 HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - cofit
mRNA_4006 12374 Hypothetical Protein + cofit
mRNA_4007 12375 K12373 HEXA_B hexosaminidase - cofit
mRNA_4008 12376 K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB - cofit
mRNA_4009 12377 K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1 - cofit
mRNA_4010 12378 HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 - cofit

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