Gene info for mRNA_4013 in Rhodosporidium toruloides IFO0880

Name: 12381
Annotation: HMMPfam-DJ-1/PfpI family-PF01965,HMMPfam-N-terminal domain of DJ-1_PfpI family-PF13587,SUPERFAMILY--SSF52317
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,153,401 to 1,154,671
See nucleotide sequence around mRNA_4013 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12376 and 12377 are separated by 400 nucleotides12377 and 12378 are separated by 616 nucleotides12378 and 12379 are separated by 384 nucleotides12379 and 12380 are separated by 224 nucleotides12380 and 12381 are separated by 913 nucleotides12381 and 12382 are separated by 228 nucleotides12382 and 12383 are separated by 162 nucleotides12383 and 12384 are separated by 39 nucleotides12384 and 12385 are separated by 456 nucleotides12385 and 12386 are separated by 228 nucleotides mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1,136,733 to 1,139,810 12376 mRNA_4009: 12377 - K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1, at 1,140,211 to 1,141,922 12377 mRNA_4010: 12378 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,142,539 to 1,145,554 12378 mRNA_4011: 12379 - HMMPfam-Retinoic acid induced 16-like protein-PF10257, at 1,145,939 to 1,149,704 12379 mRNA_4012: 12380 - KOG2370 Cactin, at 1,149,929 to 1,152,487 12380 mRNA_4013: 12381 - HMMPfam-DJ-1/PfpI family-PF01965,HMMPfam-N-terminal domain of DJ-1_PfpI family-PF13587,SUPERFAMILY--SSF52317, at 1,153,401 to 1,154,671 12381 mRNA_4014: 12382 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 1,154,900 to 1,159,801 12382 mRNA_4015: 12383 - K04512 DAAM dishevelled associated activator of morphogenesis, at 1,159,964 to 1,166,346 12383 mRNA_4016: 12384 - K01250 rihA pyrimidine-specific ribonucleoside hydrolase, at 1,166,386 to 1,167,803 12384 mRNA_4017: 12385 - K13333 PLB lysophospholipase, at 1,168,260 to 1,170,390 12385 mRNA_4018: 12386 - K09500 CCT8 T-complex protein 1 subunit theta, at 1,170,619 to 1,173,012 12386
Locus Name Description Strand Phenotype
mRNA_4008 12376 K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB - cofit
mRNA_4009 12377 K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1 - cofit
mRNA_4010 12378 HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 - cofit
mRNA_4011 12379 HMMPfam-Retinoic acid induced 16-like protein-PF10257 - cofit
mRNA_4012 12380 KOG2370 Cactin - no data
mRNA_4013 12381 HMMPfam-DJ-1/PfpI family-PF01965,HMMPfam-N-terminal domain of DJ-1_PfpI family-PF13587,SUPERFAMILY--SSF52317 - cofit
mRNA_4014 12382 KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily + cofit
mRNA_4015 12383 K04512 DAAM dishevelled associated activator of morphogenesis + cofit
mRNA_4016 12384 K01250 rihA pyrimidine-specific ribonucleoside hydrolase - cofit
mRNA_4017 12385 K13333 PLB lysophospholipase + cofit
mRNA_4018 12386 K09500 CCT8 T-complex protein 1 subunit theta - no data

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