Gene info for mRNA_4022 in Rhodosporidium toruloides IFO0880

Name: 12390
Annotation: KOG2661 Peptidase family M48
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,180,594 to 1,181,890
See nucleotide sequence around mRNA_4022 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12385 and 12386 are separated by 228 nucleotides12386 and 12387 are separated by 243 nucleotides12387 and 12388 are separated by 540 nucleotides12388 and 12389 are separated by 351 nucleotides12389 and 12390 are separated by 31 nucleotides12390 and 12391 are separated by 165 nucleotides12391 and 12392 are separated by 124 nucleotides12392 and 12393 are separated by 761 nucleotides12393 and 12394 are separated by 138 nucleotides12394 and 12395 are separated by 551 nucleotides mRNA_4017: 12385 - K13333 PLB lysophospholipase, at 1,168,260 to 1,170,390 12385 mRNA_4018: 12386 - K09500 CCT8 T-complex protein 1 subunit theta, at 1,170,619 to 1,173,012 12386 mRNA_4019: 12387 - K15116 SLC25A33_36, RIM2 solute carrier family 25, member 33/36, at 1,173,256 to 1,174,830 12387 mRNA_4020: 12388 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,175,371 to 1,177,863 12388 mRNA_4021: 12389 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,178,215 to 1,180,562 12389 mRNA_4022: 12390 - KOG2661 Peptidase family M48, at 1,180,594 to 1,181,890 12390 mRNA_4023: 12391 - K01061 E3.1.1.45 carboxymethylenebutenolidase, at 1,182,056 to 1,183,388 12391 mRNA_4024: 12392 - HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1,183,513 to 1,185,147 12392 mRNA_4025: 12393 - K15634 gpmB probable phosphoglycerate mutase, at 1,185,909 to 1,186,748 12393 mRNA_4026: 12394 - HMMPfam-Cyclin-PF08613, at 1,186,887 to 1,188,212 12394 mRNA_4027: 12395 - K12863 CWC15 protein CWC15, at 1,188,764 to 1,189,753 12395
Locus Name Description Strand Phenotype
mRNA_4017 12385 K13333 PLB lysophospholipase + cofit
mRNA_4018 12386 K09500 CCT8 T-complex protein 1 subunit theta - no data
mRNA_4019 12387 K15116 SLC25A33_36, RIM2 solute carrier family 25, member 33/36 + no data
mRNA_4020 12388 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + cofit
mRNA_4021 12389 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + insig.
mRNA_4022 12390 KOG2661 Peptidase family M48 - cofit
mRNA_4023 12391 K01061 E3.1.1.45 carboxymethylenebutenolidase - cofit
mRNA_4024 12392 HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356 + no data
mRNA_4025 12393 K15634 gpmB probable phosphoglycerate mutase - cofit
mRNA_4026 12394 HMMPfam-Cyclin-PF08613 - no data
mRNA_4027 12395 K12863 CWC15 protein CWC15 + no data

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