Gene info for mRNA_4046 in Rhodosporidium toruloides IFO0880

Name: 12414
Annotation: HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 1,229,345 to 1,230,784
See nucleotide sequence around mRNA_4046 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12409 and 12410 are separated by 125 nucleotides12410 and 12411 are separated by 539 nucleotides12411 and 12412 are separated by 152 nucleotides12412 and 12413 are separated by 492 nucleotides12413 and 12414 are separated by 240 nucleotides12414 and 12415 are separated by 2406 nucleotides12415 and 12416 are separated by 218 nucleotides12416 and 12417 are separated by 1331 nucleotides12417 and 12418 are separated by 2286 nucleotides12418 and 12419 are separated by 1460 nucleotides mRNA_4041: 12409 - HMMPfam-Sds3-like-PF08598, at 1,221,368 to 1,222,599 12409 mRNA_4042: 12410 - KOG0807 Carbon-nitrogen hydrolase, at 1,222,725 to 1,223,895 12410 mRNA_4043: 12411 - Hypothetical Protein, at 1,224,435 to 1,225,613 12411 mRNA_4044: 12412 - Hypothetical Protein, at 1,225,766 to 1,226,356 12412 mRNA_4045: 12413 - Hypothetical Protein, at 1,226,849 to 1,229,104 12413 mRNA_4046: 12414 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 1,229,345 to 1,230,784 12414 mRNA_4047: 12415 - Hypothetical Protein, at 1,233,191 to 1,233,964 12415 mRNA_4048: 12416 - Hypothetical Protein, at 1,234,183 to 1,234,746 12416 mRNA_4049: 12417 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1,236,078 to 1,237,368 12417 mRNA_4050: 12418 - K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e, at 1,239,655 to 1,240,764 12418 mRNA_4051: 12419 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1,242,225 to 1,242,676 12419
Locus Name Description Strand Phenotype
mRNA_4041 12409 HMMPfam-Sds3-like-PF08598 + cofit
mRNA_4042 12410 KOG0807 Carbon-nitrogen hydrolase - cofit
mRNA_4043 12411 Hypothetical Protein - cofit
mRNA_4044 12412 Hypothetical Protein + cofit
mRNA_4045 12413 Hypothetical Protein - cofit
mRNA_4046 12414 HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452 + cofit
mRNA_4047 12415 Hypothetical Protein + cofit
mRNA_4048 12416 Hypothetical Protein - cofit
mRNA_4049 12417 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 - cofit
mRNA_4050 12418 K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e + no data
mRNA_4051 12419 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 + insig.

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