Gene info for mRNA_4049 in Rhodosporidium toruloides IFO0880

Name: 12417
Annotation: HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,236,078 to 1,237,368
See nucleotide sequence around mRNA_4049 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12412 and 12413 are separated by 492 nucleotides12413 and 12414 are separated by 240 nucleotides12414 and 12415 are separated by 2406 nucleotides12415 and 12416 are separated by 218 nucleotides12416 and 12417 are separated by 1331 nucleotides12417 and 12418 are separated by 2286 nucleotides12418 and 12419 are separated by 1460 nucleotides12419 and 12420 are separated by 400 nucleotides12420 and 12421 are separated by 381 nucleotides12421 and 12422 are separated by 163 nucleotides mRNA_4044: 12412 - Hypothetical Protein, at 1,225,766 to 1,226,356 12412 mRNA_4045: 12413 - Hypothetical Protein, at 1,226,849 to 1,229,104 12413 mRNA_4046: 12414 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 1,229,345 to 1,230,784 12414 mRNA_4047: 12415 - Hypothetical Protein, at 1,233,191 to 1,233,964 12415 mRNA_4048: 12416 - Hypothetical Protein, at 1,234,183 to 1,234,746 12416 mRNA_4049: 12417 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1,236,078 to 1,237,368 12417 mRNA_4050: 12418 - K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e, at 1,239,655 to 1,240,764 12418 mRNA_4051: 12419 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1,242,225 to 1,242,676 12419 mRNA_4052: 12420 - HMMPfam-Transcription factor Opi1-PF08618, at 1,243,077 to 1,245,269 12420 mRNA_4053: 12421 - K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase, at 1,245,651 to 1,248,069 12421 mRNA_4054: 12422 - KOG2973 Uncharacterized conserved protein, at 1,248,233 to 1,250,054 12422
Locus Name Description Strand Phenotype
mRNA_4044 12412 Hypothetical Protein + cofit
mRNA_4045 12413 Hypothetical Protein - cofit
mRNA_4046 12414 HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452 + cofit
mRNA_4047 12415 Hypothetical Protein + cofit
mRNA_4048 12416 Hypothetical Protein - cofit
mRNA_4049 12417 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 - cofit
mRNA_4050 12418 K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e + no data
mRNA_4051 12419 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 + insig.
mRNA_4052 12420 HMMPfam-Transcription factor Opi1-PF08618 - strong
mRNA_4053 12421 K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase - no data
mRNA_4054 12422 KOG2973 Uncharacterized conserved protein + cofit

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