Gene info for mRNA_4058 in Rhodosporidium toruloides IFO0880

Name: 12426
Annotation: HMMPfam-Transcription factor Pcc1-PF09341
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,254,805 to 1,255,288
See nucleotide sequence around mRNA_4058 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12421 and 12422 are separated by 163 nucleotides12422 and 12423 are separated by 108 nucleotides12423 and 12424 are separated by 211 nucleotides12424 and 12425 are separated by 484 nucleotides12425 and 12426 are separated by 834 nucleotides12426 and 12427 are separated by 329 nucleotides12427 and 12428 are separated by 189 nucleotides12428 and 12429 are separated by 170 nucleotides12429 and 12430 are separated by 580 nucleotides12430 and 12431 are separated by 147 nucleotides mRNA_4053: 12421 - K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase, at 1,245,651 to 1,248,069 12421 mRNA_4054: 12422 - KOG2973 Uncharacterized conserved protein, at 1,248,233 to 1,250,054 12422 mRNA_4055: 12423 - HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593, at 1,250,163 to 1,250,733 12423 mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1,250,945 to 1,252,332 12424 mRNA_4057: 12425 - Hypothetical Protein, at 1,252,817 to 1,253,970 12425 mRNA_4058: 12426 - HMMPfam-Transcription factor Pcc1-PF09341, at 1,254,805 to 1,255,288 12426 mRNA_4059: 12427 - Hypothetical Protein, at 1,255,618 to 1,257,004 12427 mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1,257,194 to 1,260,711 12428 mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1,260,882 to 1,262,989 12429 mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1,263,570 to 1,264,744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1,264,892 to 1,269,621 12431
Locus Name Description Strand Phenotype
mRNA_4053 12421 K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase - no data
mRNA_4054 12422 KOG2973 Uncharacterized conserved protein + cofit
mRNA_4055 12423 HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593 - cofit
mRNA_4056 12424 BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ... + cofit
mRNA_4057 12425 Hypothetical Protein - cofit
mRNA_4058 12426 HMMPfam-Transcription factor Pcc1-PF09341 - no data
mRNA_4059 12427 Hypothetical Protein + insig.
mRNA_4060 12428 K01537 E3.6.3.8 Ca2+-transporting ATPase - cofit
mRNA_4061 12429 SUPERFAMILY--SSF52540 + cofit
mRNA_4062 12430 HMMPfam-Protein of unknown function (DUF1115)-PF06544 + cofit
mRNA_4063 12431 K10777 LIG4, DNL4 DNA ligase 4 + cofit

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