Gene info for mRNA_4063 in Rhodosporidium toruloides IFO0880

Name: 12431
Annotation: K10777 LIG4, DNL4 DNA ligase 4
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 1,264,892 to 1,269,621
See nucleotide sequence around mRNA_4063 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12426 and 12427 are separated by 329 nucleotides12427 and 12428 are separated by 189 nucleotides12428 and 12429 are separated by 170 nucleotides12429 and 12430 are separated by 580 nucleotides12430 and 12431 are separated by 147 nucleotides12431 and 12432 are separated by 105 nucleotides12432 and 12433 are separated by 138 nucleotides12433 and 12434 are separated by 946 nucleotides12434 and 12435 are separated by 131 nucleotides12435 and 12436 are separated by 539 nucleotides mRNA_4058: 12426 - HMMPfam-Transcription factor Pcc1-PF09341, at 1,254,805 to 1,255,288 12426 mRNA_4059: 12427 - Hypothetical Protein, at 1,255,618 to 1,257,004 12427 mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1,257,194 to 1,260,711 12428 mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1,260,882 to 1,262,989 12429 mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1,263,570 to 1,264,744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1,264,892 to 1,269,621 12431 mRNA_4064: 12432 - HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833, at 1,269,727 to 1,270,597 12432 mRNA_4065: 12433 - KOG1198 Zinc-binding oxidoreductase, at 1,270,736 to 1,272,325 12433 mRNA_4066: 12434 - K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase, at 1,273,272 to 1,275,258 12434 mRNA_4067: 12435 - KOG0324 Uncharacterized conserved protein, at 1,275,390 to 1,276,654 12435 mRNA_4068: 12436 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1,277,194 to 1,279,271 12436
Locus Name Description Strand Phenotype
mRNA_4058 12426 HMMPfam-Transcription factor Pcc1-PF09341 - no data
mRNA_4059 12427 Hypothetical Protein + insig.
mRNA_4060 12428 K01537 E3.6.3.8 Ca2+-transporting ATPase - cofit
mRNA_4061 12429 SUPERFAMILY--SSF52540 + cofit
mRNA_4062 12430 HMMPfam-Protein of unknown function (DUF1115)-PF06544 + cofit
mRNA_4063 12431 K10777 LIG4, DNL4 DNA ligase 4 + cofit
mRNA_4064 12432 HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833 - cofit
mRNA_4065 12433 KOG1198 Zinc-binding oxidoreductase + cofit
mRNA_4066 12434 K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase - cofit
mRNA_4067 12435 KOG0324 Uncharacterized conserved protein + cofit
mRNA_4068 12436 K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter + cofit

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