Gene info for mRNA_4124 in Rhodosporidium toruloides IFO0880

Name: 12492
Annotation: HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,405,556 to 1,407,296
See nucleotide sequence around mRNA_4124 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12487 and 12488 are separated by 1855 nucleotides12488 and 12489 are separated by 180 nucleotides12489 and 12490 are separated by 222 nucleotides12490 and 12491 are separated by 285 nucleotides12491 and 12492 are separated by 885 nucleotides12492 and 12493 are separated by 471 nucleotides12493 and 12494 are separated by 911 nucleotides12494 and 12495 are separated by 660 nucleotides12495 and 12496 are separated by 64 nucleotides12496 and 12497 are separated by 796 nucleotides mRNA_4119: 12487 - KOG0118 FOG RRM domain, at 1,395,124 to 1,396,771 12487 mRNA_4120: 12488 - Hypothetical Protein, at 1,398,627 to 1,399,035 12488 mRNA_4121: 12489 - KOG3195 Uncharacterized membrane protein NPD008/CGI-148, at 1,399,216 to 1,400,320 12489 mRNA_4122: 12490 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 1,400,543 to 1,402,480 12490 mRNA_4123: 12491 - KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily, at 1,402,766 to 1,404,670 12491 mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1,405,556 to 1,407,296 12492 mRNA_4125: 12493 - KOG0627 Heat shock transcription factor, at 1,407,768 to 1,409,382 12493 mRNA_4126: 12494 - K20408 WDR24 WD repeat-containing protein 24, at 1,410,294 to 1,414,666 12494 mRNA_4127: 12495 - K00793 ribE, RIB5 riboflavin synthase, at 1,415,327 to 1,416,353 12495 mRNA_4128: 12496 - K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4, at 1,416,418 to 1,417,570 12496 mRNA_4129: 12497 - K03949 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5, at 1,418,367 to 1,418,907 12497
Locus Name Description Strand Phenotype
mRNA_4119 12487 KOG0118 FOG RRM domain - insig.
mRNA_4120 12488 Hypothetical Protein - insig.
mRNA_4121 12489 KOG3195 Uncharacterized membrane protein NPD008/CGI-148 - cofit
mRNA_4122 12490 BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M... + no data
mRNA_4123 12491 KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily + cofit
mRNA_4124 12492 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 - cofit
mRNA_4125 12493 KOG0627 Heat shock transcription factor - cofit
mRNA_4126 12494 K20408 WDR24 WD repeat-containing protein 24 - cofit
mRNA_4127 12495 K00793 ribE, RIB5 riboflavin synthase + no data
mRNA_4128 12496 K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4 - cofit
mRNA_4129 12497 K03949 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5 + no data

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