Gene info for mRNA_4177 in Rhodosporidium toruloides IFO0880

Name: 12545
Annotation: K15356 VRG4, GONST1 GDP-mannose transporter
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,543,096 to 1,544,844
See nucleotide sequence around mRNA_4177 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12540 and 12541 are separated by 1700 nucleotides12541 and 12542 are separated by 1110 nucleotides12542 and 12543 are separated by 486 nucleotides12543 and 12544 are separated by 104 nucleotides12544 and 12545 are separated by 272 nucleotides12545 and 12546 are separated by 165 nucleotides12546 and 12547 are separated by 721 nucleotides12547 and 12548 are separated by 259 nucleotides12548 and 12549 are separated by 337 nucleotides12549 and 12550 are separated by 772 nucleotides mRNA_4172: 12540 - KOG1212 Amidases, at 1,530,143 to 1,531,631 12540 mRNA_4173: 12541 - KOG2348 Urea transporter, at 1,533,332 to 1,534,654 12541 mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1,535,765 to 1,540,719 12542 mRNA_4175: 12543 - K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, at 1,541,206 to 1,541,936 12543 mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1,542,041 to 1,542,823 12544 mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1,543,096 to 1,544,844 12545 mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1,545,010 to 1,546,616 12546 mRNA_4179: 12547 - KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death, at 1,547,338 to 1,548,132 12547 mRNA_4180: 12548 - K03260 EIF4G translation initiation factor 4G, at 1,548,392 to 1,550,884 12548 mRNA_4181: 12549 - Hypothetical Protein, at 1,551,222 to 1,553,388 12549 mRNA_4182: 12550 - K13288 orn, REX2, REXO2 oligoribonuclease, at 1,554,161 to 1,555,375 12550
Locus Name Description Strand Phenotype
mRNA_4172 12540 KOG1212 Amidases - no data
mRNA_4173 12541 KOG2348 Urea transporter + cofit
mRNA_4174 12542 KOG4305 RhoGEF GTPase - cofit
mRNA_4175 12543 K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6 + strong
mRNA_4176 12544 KOG4093 Uncharacterized conserved protein + no data
mRNA_4177 12545 K15356 VRG4, GONST1 GDP-mannose transporter - no data
mRNA_4178 12546 KOG1337 N-methyltransferase + insig.
mRNA_4179 12547 KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death + cofit
mRNA_4180 12548 K03260 EIF4G translation initiation factor 4G - no data
mRNA_4181 12549 Hypothetical Protein - no data
mRNA_4182 12550 K13288 orn, REX2, REXO2 oligoribonuclease - cofit

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