Gene info for mRNA_4220 in Rhodosporidium toruloides IFO0880

Name: 12588
Annotation: K19932 NCS1 neuronal calcium sensor 1
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,644,542 to 1,645,935
See nucleotide sequence around mRNA_4220 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12583 and 12584 are separated by 148 nucleotides12584 and 12585 are separated by 318 nucleotides12585 and 12586 are separated by 517 nucleotides12586 and 12587 are separated by 124 nucleotides12587 and 12588 are separated by 231 nucleotides12588 and 12589 are separated by 168 nucleotides12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides12591 and 12592 are separated by 78 nucleotides12592 and 12593 are separated by 355 nucleotides mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1,628,939 to 1,632,484 12583 mRNA_4216: 12584 - K13123 GPATCH1 G patch domain-containing protein 1, at 1,632,633 to 1,635,917 12584 mRNA_4217: 12585 - K14830 MAK11, PAK1IP1 protein MAK11, at 1,636,236 to 1,637,979 12585 mRNA_4218: 12586 - K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3, at 1,638,497 to 1,642,867 12586 mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1,642,992 to 1,644,310 12587 mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1,644,542 to 1,645,935 12588 mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593
Locus Name Description Strand Phenotype
mRNA_4215 12583 HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350 + cofit
mRNA_4216 12584 K13123 GPATCH1 G patch domain-containing protein 1 - cofit
mRNA_4217 12585 K14830 MAK11, PAK1IP1 protein MAK11 - no data
mRNA_4218 12586 K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3 - cofit
mRNA_4219 12587 HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979 + cofit
mRNA_4220 12588 K19932 NCS1 neuronal calcium sensor 1 - strong
mRNA_4221 12589 HMMPfam-Sodium/hydrogen exchanger family-PF00999 + cofit
mRNA_4222 12590 K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein + cofit
mRNA_4223 12591 KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase - insig.
mRNA_4224 12592 Hypothetical Protein + insig.
mRNA_4225 12593 HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342 - cofit

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