Gene info for mRNA_4223 in Rhodosporidium toruloides IFO0880

Name: 12591
Annotation: KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,648,878 to 1,650,600
See nucleotide sequence around mRNA_4223 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12586 and 12587 are separated by 124 nucleotides12587 and 12588 are separated by 231 nucleotides12588 and 12589 are separated by 168 nucleotides12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides12591 and 12592 are separated by 78 nucleotides12592 and 12593 are separated by 355 nucleotides12593 and 12594 are separated by 319 nucleotides12594 and 12595 are separated by 207 nucleotides12595 and 12596 are separated by 54 nucleotides mRNA_4218: 12586 - K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3, at 1,638,497 to 1,642,867 12586 mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1,642,992 to 1,644,310 12587 mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1,644,542 to 1,645,935 12588 mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1,655,813 to 1,659,134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1,659,342 to 1,664,294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,664,349 to 1,666,570 12596
Locus Name Description Strand Phenotype
mRNA_4218 12586 K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3 - cofit
mRNA_4219 12587 HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979 + cofit
mRNA_4220 12588 K19932 NCS1 neuronal calcium sensor 1 - strong
mRNA_4221 12589 HMMPfam-Sodium/hydrogen exchanger family-PF00999 + cofit
mRNA_4222 12590 K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein + cofit
mRNA_4223 12591 KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase - insig.
mRNA_4224 12592 Hypothetical Protein + insig.
mRNA_4225 12593 HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342 - cofit
mRNA_4226 12594 K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme - strong
mRNA_4227 12595 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452 + cofit
mRNA_4228 12596 K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase + no data

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