Gene info for mRNA_4226 in Rhodosporidium toruloides IFO0880

Name: 12594
Annotation: K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,655,813 to 1,659,134
See nucleotide sequence around mRNA_4226 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12589 and 12590 are separated by 68 nucleotides12590 and 12591 are separated by 52 nucleotides12591 and 12592 are separated by 78 nucleotides12592 and 12593 are separated by 355 nucleotides12593 and 12594 are separated by 319 nucleotides12594 and 12595 are separated by 207 nucleotides12595 and 12596 are separated by 54 nucleotides12596 and 12597 are separated by 153 nucleotides12597 and 12598 are separated by 423 nucleotides12598 and 12599 are separated by 575 nucleotides mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1,646,104 to 1,647,809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1,647,878 to 1,648,825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1,648,878 to 1,650,600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1,650,679 to 1,653,904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1,654,260 to 1,655,493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1,655,813 to 1,659,134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1,659,342 to 1,664,294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,664,349 to 1,666,570 12596 mRNA_4229: 12597 - K03145 TFIIS transcription elongation factor S-II, at 1,666,724 to 1,668,318 12597 mRNA_4230: 12598 - KOG1659 Class 2 transcription repressor NC2, alpha subunit (DRAP1), at 1,668,742 to 1,669,106 12598 mRNA_4231: 12599 - KOG4476 Gluconate transport-inducing protein, at 1,669,682 to 1,672,278 12599
Locus Name Description Strand Phenotype
mRNA_4221 12589 HMMPfam-Sodium/hydrogen exchanger family-PF00999 + cofit
mRNA_4222 12590 K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein + cofit
mRNA_4223 12591 KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase - insig.
mRNA_4224 12592 Hypothetical Protein + insig.
mRNA_4225 12593 HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342 - cofit
mRNA_4226 12594 K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme - strong
mRNA_4227 12595 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452 + cofit
mRNA_4228 12596 K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase + no data
mRNA_4229 12597 K03145 TFIIS transcription elongation factor S-II - no data
mRNA_4230 12598 KOG1659 Class 2 transcription repressor NC2, alpha subunit (DRAP1) + no data
mRNA_4231 12599 KOG4476 Gluconate transport-inducing protein - insig.

Or browse nearby genes

Or see the comparative fitness browser