Gene info for mRNA_4255 in Rhodosporidium toruloides IFO0880

Name: 12623
Annotation: HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 1,721,312 to 1,723,112
See nucleotide sequence around mRNA_4255 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12618 and 12619 are separated by 453 nucleotides12619 and 12620 are separated by 65 nucleotides12620 and 12621 are separated by 619 nucleotides12621 and 12622 are separated by 232 nucleotides12622 and 12623 are separated by 441 nucleotides12623 and 12624 are separated by 477 nucleotides12624 and 12625 are separated by 95 nucleotides12625 and 12626 are separated by 431 nucleotides12626 and 12627 are separated by 626 nucleotides12627 and 12628 are separated by 629 nucleotides mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1,711,024 to 1,714,296 12618 mRNA_4251: 12619 - K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase, at 1,714,750 to 1,715,768 12619 mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1,715,834 to 1,717,453 12620 mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1,718,073 to 1,718,994 12621 mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1,719,227 to 1,720,870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1,721,312 to 1,723,112 12623 mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1,723,590 to 1,725,479 12624 mRNA_4257: 12625 - K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+), at 1,725,575 to 1,726,851 12625 mRNA_4258: 12626 - KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily), at 1,727,283 to 1,728,545 12626 mRNA_4259: 12627 - SUPERFAMILY--SSF51445, at 1,729,172 to 1,731,284 12627 mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1,731,914 to 1,736,985 12628
Locus Name Description Strand Phenotype
mRNA_4250 12618 K08956 AFG3 AFG3 family protein + no data
mRNA_4251 12619 K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase + cofit
mRNA_4252 12620 HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118 - cofit
mRNA_4253 12621 BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis] + no data
mRNA_4254 12622 HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011 - cofit
mRNA_4255 12623 HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482 + cofit
mRNA_4256 12624 HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474 + cofit
mRNA_4257 12625 K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+) - cofit
mRNA_4258 12626 KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily) + cofit
mRNA_4259 12627 SUPERFAMILY--SSF51445 - no data
mRNA_4260 12628 K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28 - cofit

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