Gene info for mRNA_4258 in Rhodosporidium toruloides IFO0880

Name: 12626
Annotation: KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily)
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 1,727,283 to 1,728,545
See nucleotide sequence around mRNA_4258 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12621 and 12622 are separated by 232 nucleotides12622 and 12623 are separated by 441 nucleotides12623 and 12624 are separated by 477 nucleotides12624 and 12625 are separated by 95 nucleotides12625 and 12626 are separated by 431 nucleotides12626 and 12627 are separated by 626 nucleotides12627 and 12628 are separated by 629 nucleotides12628 and 12629 are separated by 832 nucleotides12629 and 12630 are separated by 165 nucleotides12630 and 12631 are separated by 164 nucleotides mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1,718,073 to 1,718,994 12621 mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1,719,227 to 1,720,870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1,721,312 to 1,723,112 12623 mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1,723,590 to 1,725,479 12624 mRNA_4257: 12625 - K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+), at 1,725,575 to 1,726,851 12625 mRNA_4258: 12626 - KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily), at 1,727,283 to 1,728,545 12626 mRNA_4259: 12627 - SUPERFAMILY--SSF51445, at 1,729,172 to 1,731,284 12627 mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1,731,914 to 1,736,985 12628 mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1,737,818 to 1,738,734 12629 mRNA_4262: 12630 - KOG2688 Transcription-associated recombination protein - Thp1p, at 1,738,900 to 1,741,067 12630 mRNA_4263: 12631 - K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic, at 1,741,232 to 1,743,677 12631
Locus Name Description Strand Phenotype
mRNA_4253 12621 BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis] + no data
mRNA_4254 12622 HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011 - cofit
mRNA_4255 12623 HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482 + cofit
mRNA_4256 12624 HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474 + cofit
mRNA_4257 12625 K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+) - cofit
mRNA_4258 12626 KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily) + cofit
mRNA_4259 12627 SUPERFAMILY--SSF51445 - no data
mRNA_4260 12628 K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28 - cofit
mRNA_4261 12629 HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811 - insig.
mRNA_4262 12630 KOG2688 Transcription-associated recombination protein - Thp1p + cofit
mRNA_4263 12631 K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic + insig.

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