Gene info for mRNA_4274 in Rhodosporidium toruloides IFO0880

Name: 12642
Annotation: K01720 prpD 2-methylcitrate dehydratase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 1,771,477 to 1,773,946
See nucleotide sequence around mRNA_4274 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12637 and 12638 are separated by 3112 nucleotides12638 and 12639 are separated by 110 nucleotides12639 and 12640 are separated by 305 nucleotides12640 and 12641 are separated by 386 nucleotides12641 and 12642 are separated by 244 nucleotides12642 and 12643 are separated by 242 nucleotides12643 and 12644 are separated by 365 nucleotides12644 and 12645 are separated by 1947 nucleotides12645 and 12646 are separated by 729 nucleotides12646 and 12647 are separated by 190 nucleotides mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1,754,378 to 1,755,256 12637 mRNA_4270: 12638 - Hypothetical Protein, at 1,758,369 to 1,759,007 12638 mRNA_4271: 12639 - K01196 AGL glycogen debranching enzyme, at 1,759,118 to 1,764,832 12639 mRNA_4272: 12640 - K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,765,138 to 1,767,269 12640 mRNA_4273: 12641 - BLAST cellular morphogenesis-related protein [Monilioph..., at 1,767,656 to 1,771,232 12641 mRNA_4274: 12642 - K01720 prpD 2-methylcitrate dehydratase, at 1,771,477 to 1,773,946 12642 mRNA_4275: 12643 - HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065, at 1,774,189 to 1,777,372 12643 mRNA_4276: 12644 - Hypothetical Protein, at 1,777,738 to 1,779,130 12644 mRNA_4277: 12645 - K08773 RALBP1 RalA-binding protein 1, at 1,781,078 to 1,785,287 12645 mRNA_4278: 12646 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,786,017 to 1,788,218 12646 mRNA_4279: 12647 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,788,409 to 1,790,808 12647
Locus Name Description Strand Phenotype
mRNA_4269 12637 K15634 gpmB probable phosphoglycerate mutase + cofit
mRNA_4270 12638 Hypothetical Protein - cofit
mRNA_4271 12639 K01196 AGL glycogen debranching enzyme - strong
mRNA_4272 12640 K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A + no data
mRNA_4273 12641 BLAST cellular morphogenesis-related protein [Monilioph... + cofit
mRNA_4274 12642 K01720 prpD 2-methylcitrate dehydratase + cofit
mRNA_4275 12643 HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065 - cofit
mRNA_4276 12644 Hypothetical Protein - cofit
mRNA_4277 12645 K08773 RALBP1 RalA-binding protein 1 - cofit
mRNA_4278 12646 HMMPfam-Voltage-dependent anion channel-PF03595 + insig.
mRNA_4279 12647 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + cofit

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