Gene info for mRNA_4280 in Rhodosporidium toruloides IFO0880

Name: 12648
Annotation: HMMPfam-Actin interacting protein 3-PF03915,SMART-Actin interacting protein 3-SM00806
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,790,909 to 1,794,329
See nucleotide sequence around mRNA_4280 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12643 and 12644 are separated by 365 nucleotides12644 and 12645 are separated by 1947 nucleotides12645 and 12646 are separated by 729 nucleotides12646 and 12647 are separated by 190 nucleotides12647 and 12648 are separated by 100 nucleotides12648 and 12649 are separated by 461 nucleotides12649 and 12650 are separated by 939 nucleotides12650 and 12651 are separated by 306 nucleotides12651 and 12652 are separated by 314 nucleotides12652 and 12653 are separated by 63 nucleotides mRNA_4275: 12643 - HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065, at 1,774,189 to 1,777,372 12643 mRNA_4276: 12644 - Hypothetical Protein, at 1,777,738 to 1,779,130 12644 mRNA_4277: 12645 - K08773 RALBP1 RalA-binding protein 1, at 1,781,078 to 1,785,287 12645 mRNA_4278: 12646 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1,786,017 to 1,788,218 12646 mRNA_4279: 12647 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,788,409 to 1,790,808 12647 mRNA_4280: 12648 - HMMPfam-Actin interacting protein 3-PF03915,SMART-Actin interacting protein 3-SM00806, at 1,790,909 to 1,794,329 12648 mRNA_4281: 12649 - K11778 DHDDS, RER2, SRT1 ditrans,polycis-polyprenyl diphosphate synthase, at 1,794,791 to 1,795,923 12649 mRNA_4282: 12650 - Hypothetical Protein, at 1,796,863 to 1,797,558 12650 mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1,797,865 to 1,800,888 12651 mRNA_4284: 12652 - KOG2806 Chitinase, at 1,801,203 to 1,803,513 12652 mRNA_4285: 12653 - K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5, at 1,803,577 to 1,805,345 12653
Locus Name Description Strand Phenotype
mRNA_4275 12643 HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065 - cofit
mRNA_4276 12644 Hypothetical Protein - cofit
mRNA_4277 12645 K08773 RALBP1 RalA-binding protein 1 - cofit
mRNA_4278 12646 HMMPfam-Voltage-dependent anion channel-PF03595 + insig.
mRNA_4279 12647 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + cofit
mRNA_4280 12648 HMMPfam-Actin interacting protein 3-PF03915,SMART-Actin interacting protein 3-SM00806 - cofit
mRNA_4281 12649 K11778 DHDDS, RER2, SRT1 ditrans,polycis-polyprenyl diphosphate synthase + no data
mRNA_4282 12650 Hypothetical Protein + cofit
mRNA_4283 12651 KOG2383 Predicted ATPase + cofit
mRNA_4284 12652 KOG2806 Chitinase + cofit
mRNA_4285 12653 K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 - no data

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