Gene info for mRNA_4324 in Rhodosporidium toruloides IFO0880

Name: 12692
Annotation: K18754 LIN28 protein lin-28
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,909,910 to 1,911,534
See nucleotide sequence around mRNA_4324 or for all of scaffold scaffold_2

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12687 and 12688 are separated by 164 nucleotides12688 and 12689 are separated by 291 nucleotides12689 and 12690 are separated by 2208 nucleotides12690 and 12691 are separated by 372 nucleotides12691 and 12692 are separated by 281 nucleotides12692 and 12693 are separated by 764 nucleotides12693 and 12694 are separated by 451 nucleotides12694 and 12695 are separated by 1230 nucleotides12695 and 12696 are separated by 266 nucleotides12696 and 12697 are separated by 677 nucleotides mRNA_4319: 12687 - Hypothetical Protein, at 1,894,697 to 1,895,182 12687 mRNA_4320: 12688 - K03255 TIF31, CLU1 protein TIF31, at 1,895,347 to 1,900,311 12688 mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1,900,603 to 1,903,265 12689 mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,905,474 to 1,907,958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440 12693 mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200 12694 mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1,916,431 to 1,918,530 12695 mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,918,797 to 1,920,453 12696 mRNA_4329: 12697 - KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1), at 1,921,131 to 1,925,118 12697
Locus Name Description Strand Phenotype
mRNA_4319 12687 Hypothetical Protein - cofit
mRNA_4320 12688 K03255 TIF31, CLU1 protein TIF31 - cofit
mRNA_4321 12689 K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1 - cofit
mRNA_4322 12690 KOG0254 Predicted transporter (major facilitator superfamily) + cofit
mRNA_4323 12691 KOG1198 Zinc-binding oxidoreductase + cofit
mRNA_4324 12692 K18754 LIN28 protein lin-28 - insig.
mRNA_4325 12693 K03231 EEF1A elongation factor 1-alpha - no data
mRNA_4326 12694 Hypothetical Protein + insig.
mRNA_4327 12695 K18754 LIN28 protein lin-28 + cofit
mRNA_4328 12696 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 - cofit
mRNA_4329 12697 KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1) + no data

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