Gene info for mRNA_4352 in Rhodosporidium toruloides IFO0880

Name: 12720
Annotation: HMMPfam-Chromo (CHRromatin Organisation MOdifier) domain-PF00385,ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160
Type 1: Protein-coding gene
Located on scaffold scaffold_20, - strand, nucleotides 14,873 to 15,217
See nucleotide sequence around mRNA_4352 or for all of scaffold scaffold_20

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12719 and 12720 are separated by 3243 nucleotides12720 and 12721 are separated by 39 nucleotides12721 and 12722 are separated by 491 nucleotides12722 and 12723 are separated by 1298 nucleotides mRNA_4351: 12719 - BLAST clampless1 Clp1 protein [Rhizoctonia solani], at 11,063 to 11,629 12719 mRNA_4352: 12720 - HMMPfam-Chromo (CHRromatin Organisation MOdifier) domain-PF00385,ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160, at 14,873 to 15,217 12720 mRNA_4353: 12721 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 15,257 to 15,583 12721 mRNA_4354: 12722 - BLAST polyprotein [Mycena chlorophos], at 16,075 to 16,311 12722 mRNA_4355: 12723 - BLAST putative Ty3/Gypsy polyprotein/retrotransposon [Rhizo..., at 17,610 to 18,449 12723
Locus Name Description Strand Phenotype
mRNA_4351 12719 BLAST clampless1 Clp1 protein [Rhizoctonia solani] + no data
mRNA_4352 12720 HMMPfam-Chromo (CHRromatin Organisation MOdifier) domain-PF00385,ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160 - no data
mRNA_4353 12721 KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations - no data
mRNA_4354 12722 BLAST polyprotein [Mycena chlorophos] - no data
mRNA_4355 12723 BLAST putative Ty3/Gypsy polyprotein/retrotransposon [Rhizo... - no data

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