Gene info for mRNA_4385 in Rhodosporidium toruloides IFO0880

Name: 12753
Annotation: HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 68,273 to 69,417
See nucleotide sequence around mRNA_4385 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12748 and 12749 are separated by 160 nucleotides12749 and 12750 are separated by 343 nucleotides12750 and 12751 are separated by 277 nucleotides12751 and 12752 are separated by 321 nucleotides12752 and 12753 are separated by 96 nucleotides12753 and 12754 are separated by 602 nucleotides12754 and 12755 are separated by 355 nucleotides12755 and 12756 are separated by 459 nucleotides12756 and 12757 are separated by 358 nucleotides12757 and 12758 are separated by 711 nucleotides mRNA_4380: 12748 - K00550 OPI3 methylene-fatty-acyl-phospholipid synthase, at 58,451 to 59,547 12748 mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59,708 to 61,504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61,848 to 63,283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63,561 to 65,177 12751 mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65,499 to 68,176 12752 mRNA_4385: 12753 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 68,273 to 69,417 12753 mRNA_4386: 12754 - BLAST polysaccharide lyase family 14 protein [Hypholoma sub..., at 70,020 to 71,335 12754 mRNA_4387: 12755 - HMMPfam-Ctf8-PF09696, at 71,691 to 72,315 12755 mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72,775 to 74,031 12756 mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74,390 to 75,580 12757 mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76,292 to 78,680 12758
Locus Name Description Strand Phenotype
mRNA_4380 12748 K00550 OPI3 methylene-fatty-acyl-phospholipid synthase + strong
mRNA_4381 12749 BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE... - cofit
mRNA_4382 12750 Hypothetical Protein - cofit
mRNA_4383 12751 Hypothetical Protein - cofit
mRNA_4384 12752 K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase + insig.
mRNA_4385 12753 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 - cofit
mRNA_4386 12754 BLAST polysaccharide lyase family 14 protein [Hypholoma sub... - cofit
mRNA_4387 12755 HMMPfam-Ctf8-PF09696 + cofit
mRNA_4388 12756 KOG2084 Predicted histone tail methylase containing SET domain - cofit
mRNA_4389 12757 K10735 GINS4, SLD5 GINS complex subunit 4 - no data
mRNA_4390 12758 K16261 YAT yeast amino acid transporter + cofit

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