Gene info for mRNA_4394 in Rhodosporidium toruloides IFO0880

Name: 12762
Annotation: ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 85,046 to 87,560
See nucleotide sequence around mRNA_4394 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12757 and 12758 are separated by 711 nucleotides12758 and 12759 are separated by 884 nucleotides12759 and 12760 overlap by 4 nucleotides12760 and 12761 are separated by 892 nucleotides12761 and 12762 are separated by 201 nucleotides12762 and 12763 are separated by 505 nucleotides12763 and 12764 are separated by 221 nucleotides12764 and 12765 are separated by 150 nucleotides12765 and 12766 are separated by 387 nucleotides12766 and 12767 are separated by 811 nucleotides mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74,390 to 75,580 12757 mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76,292 to 78,680 12758 mRNA_4391: 12759 - Hypothetical Protein, at 79,565 to 80,188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80,185 to 81,389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82,282 to 84,844 12761 mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85,046 to 87,560 12762 mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88,066 to 89,251 12763 mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89,473 to 89,864 12764 mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90,015 to 90,968 12765 mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91,356 to 92,891 12766 mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93,703 to 94,660 12767
Locus Name Description Strand Phenotype
mRNA_4389 12757 K10735 GINS4, SLD5 GINS complex subunit 4 - no data
mRNA_4390 12758 K16261 YAT yeast amino acid transporter + cofit
mRNA_4391 12759 Hypothetical Protein - cofit
mRNA_4392 12760 KOG3069 Peroxisomal NUDIX hydrolase - cofit
mRNA_4393 12761 K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) + cofit
mRNA_4394 12762 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 - cofit
mRNA_4395 12763 HMMPfam-RTA1 like protein-PF04479 + cofit
mRNA_4396 12764 BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro... - no data
mRNA_4397 12765 HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129 - no data
mRNA_4398 12766 HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 - cofit
mRNA_4399 12767 HMMPfam-CFEM domain-PF05730 + cofit

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