Gene info for mRNA_4422 in Rhodosporidium toruloides IFO0880

Name: 12790
Annotation: BLAST Regulator of nonsense transcripts UPF2 [Grifola frond...
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 145,767 to 149,805
See nucleotide sequence around mRNA_4422 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12785 and 12786 are separated by 171 nucleotides12786 and 12787 are separated by 322 nucleotides12787 and 12788 are separated by 599 nucleotides12788 and 12789 are separated by 125 nucleotides12789 and 12790 are separated by 95 nucleotides12790 and 12791 are separated by 195 nucleotides12791 and 12792 are separated by 114 nucleotides12792 and 12793 are separated by 38 nucleotides12793 and 12794 are separated by 341 nucleotides12794 and 12795 are separated by 996 nucleotides mRNA_4417: 12785 - Hypothetical Protein, at 136,437 to 137,903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138,075 to 139,542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139,865 to 142,182 12787 mRNA_4420: 12788 - Hypothetical Protein, at 142,782 to 144,296 12788 mRNA_4421: 12789 - K17765 MDM12 mitochondrial distribution and morphology protein 12, at 144,422 to 145,671 12789 mRNA_4422: 12790 - BLAST Regulator of nonsense transcripts UPF2 [Grifola frond..., at 145,767 to 149,805 12790 mRNA_4423: 12791 - K09528 DNAJC8 DnaJ homolog subfamily C member 8, at 150,001 to 151,135 12791 mRNA_4424: 12792 - KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins, at 151,250 to 153,858 12792 mRNA_4425: 12793 - KOG3844 Predicted component of NuA3 histone acetyltransferase complex, at 153,897 to 156,025 12793 mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156,367 to 159,071 12794 mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160,068 to 161,346 12795
Locus Name Description Strand Phenotype
mRNA_4417 12785 Hypothetical Protein + cofit
mRNA_4418 12786 KOG3683 Uncharacterized conserved protein - cofit
mRNA_4419 12787 K11121 SIR2 NAD-dependent histone deacetylase SIR2 - cofit
mRNA_4420 12788 Hypothetical Protein - cofit
mRNA_4421 12789 K17765 MDM12 mitochondrial distribution and morphology protein 12 + no data
mRNA_4422 12790 BLAST Regulator of nonsense transcripts UPF2 [Grifola frond... - cofit
mRNA_4423 12791 K09528 DNAJC8 DnaJ homolog subfamily C member 8 - no data
mRNA_4424 12792 KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins + no data
mRNA_4425 12793 KOG3844 Predicted component of NuA3 histone acetyltransferase complex - cofit
mRNA_4426 12794 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 - insig.
mRNA_4427 12795 K11539 CBR4 carbonyl reductase 4 + cofit

Or browse nearby genes

Or see the comparative fitness browser