Gene info for mRNA_4485 in Rhodosporidium toruloides IFO0880

Name: 12853
Annotation: K01293 E3.4.17.4 Gly-Xaa carboxypeptidase
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 294,056 to 296,303
See nucleotide sequence around mRNA_4485 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12848 and 12849 are separated by 199 nucleotides12849 and 12850 are separated by 315 nucleotides12850 and 12851 are separated by 107 nucleotides12851 and 12852 are separated by 153 nucleotides12852 and 12853 are separated by 222 nucleotides12853 and 12854 are separated by 273 nucleotides12854 and 12855 are separated by 719 nucleotides12855 and 12856 are separated by 336 nucleotides12856 and 12857 are separated by 215 nucleotides12857 and 12858 are separated by 436 nucleotides mRNA_4480: 12848 - Hypothetical Protein, at 283,832 to 284,551 12848 mRNA_4481: 12849 - Hypothetical Protein, at 284,751 to 285,386 12849 mRNA_4482: 12850 - K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4, at 285,702 to 287,837 12850 mRNA_4483: 12851 - SUPERFAMILY--SSF53098, at 287,945 to 289,726 12851 mRNA_4484: 12852 - KOG2588 Predicted DNA-binding protein, at 289,880 to 293,833 12852 mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294,056 to 296,303 12853 mRNA_4486: 12854 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 296,577 to 298,255 12854 mRNA_4487: 12855 - K05857 PLCD phosphatidylinositol phospholipase C, delta, at 298,975 to 301,181 12855 mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301,518 to 302,496 12856 mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302,712 to 304,024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304,461 to 305,865 12858
Locus Name Description Strand Phenotype
mRNA_4480 12848 Hypothetical Protein + cofit
mRNA_4481 12849 Hypothetical Protein + cofit
mRNA_4482 12850 K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4 + no data
mRNA_4483 12851 SUPERFAMILY--SSF53098 + no data
mRNA_4484 12852 KOG2588 Predicted DNA-binding protein - strong
mRNA_4485 12853 K01293 E3.4.17.4 Gly-Xaa carboxypeptidase - cofit
mRNA_4486 12854 K01293 E3.4.17.4 Gly-Xaa carboxypeptidase - cofit
mRNA_4487 12855 K05857 PLCD phosphatidylinositol phospholipase C, delta - no data
mRNA_4488 12856 BLAST phospholipase C [Moesziomyces antarcticus T-34] - no data
mRNA_4489 12857 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - cofit
mRNA_4490 12858 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + cofit

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