Gene info for mRNA_4523 in Rhodosporidium toruloides IFO0880

Name: 12891
Annotation: HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 377,162 to 379,234
See nucleotide sequence around mRNA_4523 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12886 and 12887 are separated by 979 nucleotides12887 and 12888 are separated by 887 nucleotides12888 and 12889 are separated by 250 nucleotides12889 and 12890 are separated by 127 nucleotides12890 and 12891 are separated by 27 nucleotides12891 and 12892 are separated by 405 nucleotides12892 and 12893 are separated by 460 nucleotides12893 and 12894 are separated by 256 nucleotides12894 and 12895 are separated by 262 nucleotides12895 and 12896 are separated by 509 nucleotides mRNA_4518: 12886 - Hypothetical Protein, at 369,280 to 370,567 12886 mRNA_4519: 12887 - Hypothetical Protein, at 371,547 to 373,000 12887 mRNA_4520: 12888 - Hypothetical Protein, at 373,888 to 374,415 12888 mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374,666 to 375,210 12889 mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375,338 to 377,134 12890 mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377,162 to 379,234 12891 mRNA_4524: 12892 - Hypothetical Protein, at 379,640 to 380,547 12892 mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381,008 to 382,487 12893 mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382,744 to 384,550 12894 mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384,813 to 386,229 12895 mRNA_4528: 12896 - Hypothetical Protein, at 386,739 to 388,320 12896
Locus Name Description Strand Phenotype
mRNA_4518 12886 Hypothetical Protein + cofit
mRNA_4519 12887 Hypothetical Protein - cofit
mRNA_4520 12888 Hypothetical Protein + cofit
mRNA_4521 12889 SUPERFAMILY--SSF117018 + cofit
mRNA_4522 12890 KOG0967 ATP-dependent DNA ligase I + insig.
mRNA_4523 12891 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 - cofit
mRNA_4524 12892 Hypothetical Protein + cofit
mRNA_4525 12893 KOG0143 Iron/ascorbate family oxidoreductases + cofit
mRNA_4526 12894 K12446 E2.7.1.46 L-arabinokinase + cofit
mRNA_4527 12895 SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 + cofit
mRNA_4528 12896 Hypothetical Protein - cofit

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