Gene info for mRNA_4541 in Rhodosporidium toruloides IFO0880

Name: 12909
Annotation: K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 417,161 to 419,747
See nucleotide sequence around mRNA_4541 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12904 and 12905 are separated by 375 nucleotides12905 and 12906 are separated by 139 nucleotides12906 and 12907 are separated by 80 nucleotides12907 and 12908 are separated by 181 nucleotides12908 and 12909 are separated by 873 nucleotides12909 and 12910 are separated by 1002 nucleotides12910 and 12911 are separated by 248 nucleotides12911 and 12912 are separated by 986 nucleotides12912 and 12913 are separated by 708 nucleotides12913 and 12914 are separated by 286 nucleotides mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404,129 to 405,942 12904 mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406,318 to 409,422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409,562 to 410,663 12906 mRNA_4539: 12907 - HMMPfam-DNA polymerase subunit Cdc27-PF09507, at 410,744 to 412,303 12907 mRNA_4540: 12908 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 412,485 to 416,287 12908 mRNA_4541: 12909 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 417,161 to 419,747 12909 mRNA_4542: 12910 - K05302 SETD6 N-lysine methyltransferase SETD6, at 420,750 to 422,529 12910 mRNA_4543: 12911 - HMMPfam-Rrp15p-PF07890, at 422,778 to 423,805 12911 mRNA_4544: 12912 - K01251 E3.3.1.1, ahcY adenosylhomocysteinase, at 424,792 to 427,173 12912 mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427,882 to 428,716 12913 mRNA_4546: 12914 - K16576 ACTR10, ARP11 actin-related protein 10, at 429,003 to 431,242 12914
Locus Name Description Strand Phenotype
mRNA_4536 12904 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - insig.
mRNA_4537 12905 KOG0472 Leucine-rich repeat protein + insig.
mRNA_4538 12906 KOG2112 Lysophospholipase - cofit
mRNA_4539 12907 HMMPfam-DNA polymerase subunit Cdc27-PF09507 + no data
mRNA_4540 12908 BLAST putative protein [Melanopsichium pennsylvanicum 4] - cofit
mRNA_4541 12909 K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family - cofit
mRNA_4542 12910 K05302 SETD6 N-lysine methyltransferase SETD6 - cofit
mRNA_4543 12911 HMMPfam-Rrp15p-PF07890 - no data
mRNA_4544 12912 K01251 E3.3.1.1, ahcY adenosylhomocysteinase + no data
mRNA_4545 12913 K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3 + no data
mRNA_4546 12914 K16576 ACTR10, ARP11 actin-related protein 10 + no data

Or browse nearby genes

Or see the comparative fitness browser