Gene info for mRNA_4564 in Rhodosporidium toruloides IFO0880

Name: 12932
Annotation: K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 473,313 to 477,203
See nucleotide sequence around mRNA_4564 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12927 and 12928 are separated by 558 nucleotides12928 and 12929 are separated by 208 nucleotides12929 and 12930 are separated by 495 nucleotides12930 and 12931 are separated by 551 nucleotides12931 and 12932 are separated by 675 nucleotides12932 and 12933 are separated by 478 nucleotides12933 and 12934 are separated by 147 nucleotides12934 and 12935 are separated by 268 nucleotides12935 and 12936 are separated by 219 nucleotides12936 and 12937 are separated by 155 nucleotides mRNA_4559: 12927 - HMMPfam-PAP2 superfamily-PF01569,SMART-Acid phosphatase homologues-SM00014,SUPERFAMILY--SSF48317, at 460,890 to 462,526 12927 mRNA_4560: 12928 - Hypothetical Protein, at 463,085 to 464,279 12928 mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464,488 to 466,003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466,499 to 468,748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469,300 to 472,637 12931 mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473,313 to 477,203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477,682 to 479,259 12933 mRNA_4566: 12934 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 479,407 to 483,783 12934 mRNA_4567: 12935 - K10743 RNASEH2A ribonuclease H2 subunit A, at 484,052 to 485,585 12935 mRNA_4568: 12936 - Hypothetical Protein, at 485,805 to 489,325 12936 mRNA_4569: 12937 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 489,481 to 490,955 12937
Locus Name Description Strand Phenotype
mRNA_4559 12927 HMMPfam-PAP2 superfamily-PF01569,SMART-Acid phosphatase homologues-SM00014,SUPERFAMILY--SSF48317 - no data
mRNA_4560 12928 Hypothetical Protein - cofit
mRNA_4561 12929 K06990 MEMO1 MEMO1 family protein - cofit
mRNA_4562 12930 K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51 + cofit
mRNA_4563 12931 KOG1601 GATA-4/5/6 transcription factors - insig.
mRNA_4564 12932 K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45 - cofit
mRNA_4565 12933 KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase + cofit
mRNA_4566 12934 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins - cofit
mRNA_4567 12935 K10743 RNASEH2A ribonuclease H2 subunit A + cofit
mRNA_4568 12936 Hypothetical Protein + cofit
mRNA_4569 12937 HMMPfam-Integral peroxisomal membrane peroxin-PF06398 - insig.

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