Gene info for mRNA_4577 in Rhodosporidium toruloides IFO0880

Name: 12945
Annotation: HMMPfam-CFEM domain-PF05730,SMART--SM00747
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 504,729 to 505,838
See nucleotide sequence around mRNA_4577 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12940 and 12941 are separated by 123 nucleotides12941 and 12942 are separated by 54 nucleotides12942 and 12943 are separated by 271 nucleotides12943 and 12944 are separated by 287 nucleotides12944 and 12945 are separated by 751 nucleotides12945 and 12946 are separated by 680 nucleotides12946 and 12947 are separated by 1508 nucleotides12947 and 12948 are separated by 1220 nucleotides12948 and 12949 are separated by 265 nucleotides12949 and 12950 are separated by 497 nucleotides mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495,766 to 497,109 12940 mRNA_4573: 12941 - K03142 TFIIH2, GTF2H2, SSL1 transcription initiation factor TFIIH subunit 2, at 497,233 to 498,989 12941 mRNA_4574: 12942 - K12184 VPS28 ESCRT-I complex subunit VPS28, at 499,044 to 500,144 12942 mRNA_4575: 12943 - HMMPfam-ICE2-PF08426, at 500,416 to 502,164 12943 mRNA_4576: 12944 - K00787 FDPS farnesyl diphosphate synthase, at 502,452 to 503,977 12944 mRNA_4577: 12945 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 504,729 to 505,838 12945 mRNA_4578: 12946 - Hypothetical Protein, at 506,519 to 507,162 12946 mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163 12947 mRNA_4580: 12948 - Hypothetical Protein, at 512,384 to 513,483 12948 mRNA_4581: 12949 - K17964 LRPPRC leucine-rich PPR motif-containing protein, mitochondrial, at 513,749 to 516,613 12949 mRNA_4582: 12950 - KOG2450 Aldehyde dehydrogenase, at 517,111 to 519,102 12950
Locus Name Description Strand Phenotype
mRNA_4572 12940 K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1 - no data
mRNA_4573 12941 K03142 TFIIH2, GTF2H2, SSL1 transcription initiation factor TFIIH subunit 2 + no data
mRNA_4574 12942 K12184 VPS28 ESCRT-I complex subunit VPS28 - no data
mRNA_4575 12943 HMMPfam-ICE2-PF08426 + cofit
mRNA_4576 12944 K00787 FDPS farnesyl diphosphate synthase + no data
mRNA_4577 12945 HMMPfam-CFEM domain-PF05730,SMART--SM00747 + cofit
mRNA_4578 12946 Hypothetical Protein + no data
mRNA_4579 12947 KOG1399 Flavin-containing monooxygenase - cofit
mRNA_4580 12948 Hypothetical Protein + cofit
mRNA_4581 12949 K17964 LRPPRC leucine-rich PPR motif-containing protein, mitochondrial + no data
mRNA_4582 12950 KOG2450 Aldehyde dehydrogenase + cofit

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