Gene info for mRNA_4605 in Rhodosporidium toruloides IFO0880

Name: 12973
Annotation: KOG0254 Predicted transporter (major facilitator superfamily)
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 568,226 to 569,633
See nucleotide sequence around mRNA_4605 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 12968 and 12969 are separated by 115 nucleotides12969 and 12970 are separated by 285 nucleotides12970 and 12971 are separated by 406 nucleotides12971 and 12972 are separated by 600 nucleotides12972 and 12973 are separated by 238 nucleotides12973 and 12974 are separated by 261 nucleotides12974 and 12975 are separated by 84 nucleotides12975 and 12976 are separated by 591 nucleotides12976 and 12977 are separated by 350 nucleotides12977 and 12978 are separated by 1223 nucleotides mRNA_4600: 12968 - K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3, at 558,585 to 560,759 12968 mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560,875 to 561,580 12969 mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561,866 to 562,949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563,356 to 565,108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565,709 to 567,987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568,226 to 569,633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569,895 to 571,183 12974 mRNA_4607: 12975 - BLAST TrfA domain protein, putative [Rhizoctonia solani AG-..., at 571,268 to 571,973 12975 mRNA_4608: 12976 - KOG0254 Predicted transporter (major facilitator superfamily), at 572,565 to 575,380 12976 mRNA_4609: 12977 - K00008 SORD, gutB L-iditol 2-dehydrogenase, at 575,731 to 577,281 12977 mRNA_4610: 12978 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 578,505 to 580,784 12978
Locus Name Description Strand Phenotype
mRNA_4600 12968 K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3 - strong
mRNA_4601 12969 HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032 + no data
mRNA_4602 12970 HMMPfam-NYN domain-PF01936 - cofit
mRNA_4603 12971 K07119 K07119 uncharacterized protein - cofit
mRNA_4604 12972 K10747 LIG1 DNA ligase 1 - no data
mRNA_4605 12973 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_4606 12974 HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 - cofit
mRNA_4607 12975 BLAST TrfA domain protein, putative [Rhizoctonia solani AG-... - cofit
mRNA_4608 12976 KOG0254 Predicted transporter (major facilitator superfamily) - cofit
mRNA_4609 12977 K00008 SORD, gutB L-iditol 2-dehydrogenase + insig.
mRNA_4610 12978 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit

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