Gene info for mRNA_4710 in Rhodosporidium toruloides IFO0880

Name: 13078
Annotation: BLAST putative mannoprotein [Rhizoctonia solani 123E]
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 824,184 to 826,218
See nucleotide sequence around mRNA_4710 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13073 and 13074 are separated by 343 nucleotides13074 and 13075 are separated by 355 nucleotides13075 and 13076 are separated by 247 nucleotides13076 and 13077 are separated by 340 nucleotides13077 and 13078 are separated by 704 nucleotides13078 and 13079 are separated by 328 nucleotides13079 and 13080 are separated by 232 nucleotides13080 and 13081 are separated by 334 nucleotides13081 and 13082 are separated by 124 nucleotides13082 and 13083 are separated by 115 nucleotides mRNA_4705: 13073 - K06065 NCOR2, SMRT nuclear receptor co-repressor 2, at 810,527 to 816,039 13073 mRNA_4706: 13074 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 816,383 to 818,450 13074 mRNA_4707: 13075 - KOG4431 Uncharacterized protein, induced by hypoxia , at 818,806 to 819,404 13075 mRNA_4708: 13076 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 819,652 to 821,476 13076 mRNA_4709: 13077 - Hypothetical Protein, at 821,817 to 823,479 13077 mRNA_4710: 13078 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 824,184 to 826,218 13078 mRNA_4711: 13079 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 826,547 to 830,720 13079 mRNA_4712: 13080 - HMMPfam-N-terminal C2 in EEIG1 and EHBP1 proteins-PF10358, at 830,953 to 834,055 13080 mRNA_4713: 13081 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 834,390 to 838,234 13081 mRNA_4714: 13082 - K01183 E3.2.1.14 chitinase, at 838,359 to 840,435 13082 mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840,551 to 841,550 13083
Locus Name Description Strand Phenotype
mRNA_4705 13073 K06065 NCOR2, SMRT nuclear receptor co-repressor 2 + cofit
mRNA_4706 13074 KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily - no data
mRNA_4707 13075 KOG4431 Uncharacterized protein, induced by hypoxia + cofit
mRNA_4708 13076 BLAST expressed protein [Cryptococcus neoformans var. neofo... + strong
mRNA_4709 13077 Hypothetical Protein + cofit
mRNA_4710 13078 BLAST putative mannoprotein [Rhizoctonia solani 123E] + cofit
mRNA_4711 13079 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily + cofit
mRNA_4712 13080 HMMPfam-N-terminal C2 in EEIG1 and EHBP1 proteins-PF10358 - cofit
mRNA_4713 13081 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_4714 13082 K01183 E3.2.1.14 chitinase - cofit
mRNA_4715 13083 KOG1730 Thioredoxin-like protein + cofit

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