Gene info for mRNA_4718 in Rhodosporidium toruloides IFO0880

Name: 13086
Annotation: HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 846,943 to 849,026
See nucleotide sequence around mRNA_4718 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13081 and 13082 are separated by 124 nucleotides13082 and 13083 are separated by 115 nucleotides13083 and 13084 are separated by 222 nucleotides13084 and 13085 are separated by 1417 nucleotides13085 and 13086 are separated by 841 nucleotides13086 and 13087 are separated by 283 nucleotides13087 and 13088 are separated by 283 nucleotides13088 and 13089 are separated by 242 nucleotides13089 and 13090 are separated by 345 nucleotides13090 and 13091 are separated by 244 nucleotides mRNA_4713: 13081 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 834,390 to 838,234 13081 mRNA_4714: 13082 - K01183 E3.2.1.14 chitinase, at 838,359 to 840,435 13082 mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840,551 to 841,550 13083 mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841,773 to 842,668 13084 mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844,086 to 846,101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846,943 to 849,026 13086 mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849,310 to 850,936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851,220 to 854,422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858,449 to 860,854 13090 mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312 13091
Locus Name Description Strand Phenotype
mRNA_4713 13081 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_4714 13082 K01183 E3.2.1.14 chitinase - cofit
mRNA_4715 13083 KOG1730 Thioredoxin-like protein + cofit
mRNA_4716 13084 SUPERFAMILY--SSF55753 + cofit
mRNA_4717 13085 BLAST putative proteasome regulatory subunit 12 [Rhizoctoni... - insig.
mRNA_4718 13086 HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870 - cofit
mRNA_4719 13087 K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase + cofit
mRNA_4720 13088 K01415 ECE endothelin-converting enzyme + cofit
mRNA_4721 13089 K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4 + cofit
mRNA_4722 13090 K01027 OXCT 3-oxoacid CoA-transferase - insig.
mRNA_4723 13091 Hypothetical Protein - cofit

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