Gene info for mRNA_4762 in Rhodosporidium toruloides IFO0880

Name: 13130
Annotation: HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 946,790 to 947,960
See nucleotide sequence around mRNA_4762 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13125 and 13126 are separated by 273 nucleotides13126 and 13127 are separated by 1100 nucleotides13127 and 13128 are separated by 174 nucleotides13128 and 13129 are separated by 315 nucleotides13129 and 13130 are separated by 1095 nucleotides13130 and 13131 are separated by 709 nucleotides13131 and 13132 are separated by 2243 nucleotides13132 and 13133 are separated by 279 nucleotides13133 and 13134 are separated by 239 nucleotides13134 and 13135 are separated by 322 nucleotides mRNA_4757: 13125 - Hypothetical Protein, at 937,399 to 937,793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938,067 to 939,280 13126 mRNA_4759: 13127 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 940,381 to 941,157 13127 mRNA_4760: 13128 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 941,332 to 944,070 13128 mRNA_4761: 13129 - K02735 PSMB3 20S proteasome subunit beta 3, at 944,386 to 945,694 13129 mRNA_4762: 13130 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 946,790 to 947,960 13130 mRNA_4763: 13131 - KOG1263 Multicopper oxidases, at 948,670 to 952,404 13131 mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954,648 to 957,720 13132 mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958,000 to 961,527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961,767 to 963,160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963,483 to 966,203 13135
Locus Name Description Strand Phenotype
mRNA_4757 13125 Hypothetical Protein + cofit
mRNA_4758 13126 HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911 + cofit
mRNA_4759 13127 HMMPfam-Fungal cellulose binding domain-PF00734,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 - cofit
mRNA_4760 13128 K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein - insig.
mRNA_4761 13129 K02735 PSMB3 20S proteasome subunit beta 3 + no data
mRNA_4762 13130 HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 + insig.
mRNA_4763 13131 KOG1263 Multicopper oxidases - insig.
mRNA_4764 13132 K12842 SR140 U2-associated protein SR140 + cofit
mRNA_4765 13133 SUPERFAMILY--SSF52058 + insig.
mRNA_4766 13134 BLAST ribonuclease e [Moniliophthora roreri MCA 2997] - cofit
mRNA_4767 13135 KOG1263 Multicopper oxidases - cofit

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