Gene info for mRNA_4793 in Rhodosporidium toruloides IFO0880

Name: 13161
Annotation: HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,025,868 to 1,027,318
See nucleotide sequence around mRNA_4793 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13156 and 13157 are separated by 358 nucleotides13157 and 13158 are separated by 737 nucleotides13158 and 13159 are separated by 1350 nucleotides13159 and 13160 are separated by 940 nucleotides13160 and 13161 are separated by 1516 nucleotides13161 and 13162 are separated by 352 nucleotides13162 and 13163 are separated by 353 nucleotides13163 and 13164 are separated by 1468 nucleotides13164 and 13165 are separated by 748 nucleotides13165 and 13166 are separated by 622 nucleotides mRNA_4788: 13156 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,014,741 to 1,016,024 13156 mRNA_4789: 13157 - K18402 PHF20 PHD finger protein 20, at 1,016,383 to 1,018,943 13157 mRNA_4790: 13158 - Hypothetical Protein, at 1,019,681 to 1,020,226 13158 mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160 mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1,025,868 to 1,027,318 13161 mRNA_4794: 13162 - Hypothetical Protein, at 1,027,671 to 1,028,225 13162 mRNA_4795: 13163 - Hypothetical Protein, at 1,028,579 to 1,029,667 13163 mRNA_4796: 13164 - Hypothetical Protein, at 1,031,136 to 1,031,744 13164 mRNA_4797: 13165 - K02901 RP-L27e, RPL27 large subunit ribosomal protein L27e, at 1,032,493 to 1,033,632 13165 mRNA_4798: 13166 - Hypothetical Protein, at 1,034,255 to 1,037,154 13166
Locus Name Description Strand Phenotype
mRNA_4788 13156 KOG0143 Iron/ascorbate family oxidoreductases - cofit
mRNA_4789 13157 K18402 PHF20 PHD finger protein 20 - no data
mRNA_4790 13158 Hypothetical Protein + cofit
mRNA_4791 13159 ProSiteProfiles-BTB domain profile.-PS50097 - cofit
mRNA_4792 13160 Hypothetical Protein - cofit
mRNA_4793 13161 HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113 + strong
mRNA_4794 13162 Hypothetical Protein - cofit
mRNA_4795 13163 Hypothetical Protein - insig.
mRNA_4796 13164 Hypothetical Protein - no data
mRNA_4797 13165 K02901 RP-L27e, RPL27 large subunit ribosomal protein L27e - no data
mRNA_4798 13166 Hypothetical Protein + cofit

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