Gene info for mRNA_4854 in Rhodosporidium toruloides IFO0880

Name: 13222
Annotation: ProSiteProfiles-BTB domain profile.-PS50097
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 1,155,001 to 1,156,417
See nucleotide sequence around mRNA_4854 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13217 and 13218 are separated by 347 nucleotides13218 and 13219 are separated by 288 nucleotides13219 and 13220 are separated by 156 nucleotides13220 and 13221 are separated by 261 nucleotides13221 and 13222 are separated by 545 nucleotides13222 and 13223 are separated by 474 nucleotides13223 and 13224 are separated by 625 nucleotides13224 and 13225 are separated by 244 nucleotides13225 and 13226 are separated by 453 nucleotides13226 and 13227 are separated by 1435 nucleotides mRNA_4849: 13217 - HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176, at 1,141,315 to 1,143,566 13217 mRNA_4850: 13218 - K02309 DBF4 regulatory subunit for Cdc7p protein kinase, at 1,143,914 to 1,146,258 13218 mRNA_4851: 13219 - K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1, at 1,146,547 to 1,149,479 13219 mRNA_4852: 13220 - Hypothetical Protein, at 1,149,636 to 1,152,739 13220 mRNA_4853: 13221 - Hypothetical Protein, at 1,153,001 to 1,154,455 13221 mRNA_4854: 13222 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,155,001 to 1,156,417 13222 mRNA_4855: 13223 - K02957 RP-S15Ae, RPS15A small subunit ribosomal protein S15Ae, at 1,156,892 to 1,157,465 13223 mRNA_4856: 13224 - K02962 RP-S17e, RPS17 small subunit ribosomal protein S17e, at 1,158,091 to 1,158,882 13224 mRNA_4857: 13225 - Hypothetical Protein, at 1,159,127 to 1,160,011 13225 mRNA_4858: 13226 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,160,465 to 1,161,653 13226 mRNA_4859: 13227 - Hypothetical Protein, at 1,163,089 to 1,163,880 13227
Locus Name Description Strand Phenotype
mRNA_4849 13217 HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176 - cofit
mRNA_4850 13218 K02309 DBF4 regulatory subunit for Cdc7p protein kinase + no data
mRNA_4851 13219 K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1 - cofit
mRNA_4852 13220 Hypothetical Protein + insig.
mRNA_4853 13221 Hypothetical Protein - cofit
mRNA_4854 13222 ProSiteProfiles-BTB domain profile.-PS50097 - cofit
mRNA_4855 13223 K02957 RP-S15Ae, RPS15A small subunit ribosomal protein S15Ae - no data
mRNA_4856 13224 K02962 RP-S17e, RPS17 small subunit ribosomal protein S17e + no data
mRNA_4857 13225 Hypothetical Protein + insig.
mRNA_4858 13226 BLAST transmembrane protein, putative [Rhizoctonia solani A... + cofit
mRNA_4859 13227 Hypothetical Protein + cofit

Or browse nearby genes

Or see the comparative fitness browser