Gene info for mRNA_4885 in Rhodosporidium toruloides IFO0880

Name: 13253
Annotation: K03105 SRP19 signal recognition particle subunit SRP19
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,219,636 to 1,220,593
See nucleotide sequence around mRNA_4885 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13248 and 13249 are separated by 319 nucleotides13249 and 13250 are separated by 491 nucleotides13250 and 13251 are separated by 301 nucleotides13251 and 13252 are separated by 481 nucleotides13252 and 13253 are separated by 280 nucleotides13253 and 13254 are separated by 249 nucleotides13254 and 13255 are separated by 155 nucleotides13255 and 13256 are separated by 694 nucleotides13256 and 13257 are separated by 87 nucleotides13257 and 13258 are separated by 347 nucleotides mRNA_4880: 13248 - K17795 TIM17 mitochondrial import inner membrane translocase subunit TIM17, at 1,211,374 to 1,212,342 13248 mRNA_4881: 13249 - K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain, at 1,212,662 to 1,215,264 13249 mRNA_4882: 13250 - Hypothetical Protein, at 1,215,756 to 1,216,865 13250 mRNA_4883: 13251 - HMMPfam-Uncharacterised protein family (UPF0203)-PF05254, at 1,217,167 to 1,217,657 13251 mRNA_4884: 13252 - K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1, at 1,218,139 to 1,219,355 13252 mRNA_4885: 13253 - K03105 SRP19 signal recognition particle subunit SRP19, at 1,219,636 to 1,220,593 13253 mRNA_4886: 13254 - Hypothetical Protein, at 1,220,843 to 1,222,544 13254 mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1,222,700 to 1,223,919 13255 mRNA_4888: 13256 - K20044 PICALM phosphatidylinositol-binding clathrin assembly protein, at 1,224,614 to 1,227,335 13256 mRNA_4889: 13257 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,227,423 to 1,230,111 13257 mRNA_4890: 13258 - HMMPfam-SH3 domain-PF00018,HMMPfam-Cortical protein marker for cell polarity-PF12768,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF69322, at 1,230,459 to 1,234,781 13258
Locus Name Description Strand Phenotype
mRNA_4880 13248 K17795 TIM17 mitochondrial import inner membrane translocase subunit TIM17 - no data
mRNA_4881 13249 K01890 FARSB, pheT phenylalanyl-tRNA synthetase beta chain - no data
mRNA_4882 13250 Hypothetical Protein - cofit
mRNA_4883 13251 HMMPfam-Uncharacterised protein family (UPF0203)-PF05254 + no data
mRNA_4884 13252 K07555 ATPeAF1, ATPAF1, ATP11 ATP synthase mitochondrial F1 complex assembly factor 1 + no data
mRNA_4885 13253 K03105 SRP19 signal recognition particle subunit SRP19 + insig.
mRNA_4886 13254 Hypothetical Protein + insig.
mRNA_4887 13255 K11365 SGF73 SAGA-associated factor 73 - cofit
mRNA_4888 13256 K20044 PICALM phosphatidylinositol-binding clathrin assembly protein + insig.
mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit
mRNA_4890 13258 HMMPfam-SH3 domain-PF00018,HMMPfam-Cortical protein marker for cell polarity-PF12768,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF69322 - no data

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