Gene info for mRNA_4902 in Rhodosporidium toruloides IFO0880

Name: 13270
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,263,087 to 1,265,892
See nucleotide sequence around mRNA_4902 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13265 and 13266 are separated by 370 nucleotides13266 and 13267 are separated by 119 nucleotides13267 and 13268 are separated by 504 nucleotides13268 and 13269 are separated by 592 nucleotides13269 and 13270 are separated by 439 nucleotides13270 and 13271 are separated by 118 nucleotides13271 and 13272 are separated by 143 nucleotides13272 and 13273 are separated by 292 nucleotides13273 and 13274 are separated by 58 nucleotides13274 and 13275 are separated by 288 nucleotides mRNA_4897: 13265 - K01759 GLO1, gloA lactoylglutathione lyase, at 1,252,541 to 1,253,295 13265 mRNA_4898: 13266 - HMMPfam-TAP-like protein-PF08386,SUPERFAMILY--SSF53474, at 1,253,666 to 1,256,190 13266 mRNA_4899: 13267 - KOG4705 Uncharacterized conserved protein, at 1,256,310 to 1,257,849 13267 mRNA_4900: 13268 - HMMPfam-NADH-ubiquinone oxidoreductase B12 subunit family-PF08122, at 1,258,354 to 1,258,880 13268 mRNA_4901: 13269 - K03163 TOP1 DNA topoisomerase I, at 1,259,473 to 1,262,647 13269 mRNA_4902: 13270 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,263,087 to 1,265,892 13270 mRNA_4903: 13271 - BLAST topoisomerase i [Xanthophyllomyces dendrorhous], at 1,266,011 to 1,266,275 13271 mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1,266,419 to 1,270,865 13272 mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1,271,158 to 1,273,410 13273 mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1,273,469 to 1,274,303 13274 mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1,274,592 to 1,274,946 13275
Locus Name Description Strand Phenotype
mRNA_4897 13265 K01759 GLO1, gloA lactoylglutathione lyase - cofit
mRNA_4898 13266 HMMPfam-TAP-like protein-PF08386,SUPERFAMILY--SSF53474 + insig.
mRNA_4899 13267 KOG4705 Uncharacterized conserved protein - cofit
mRNA_4900 13268 HMMPfam-NADH-ubiquinone oxidoreductase B12 subunit family-PF08122 - no data
mRNA_4901 13269 K03163 TOP1 DNA topoisomerase I + no data
mRNA_4902 13270 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_4903 13271 BLAST topoisomerase i [Xanthophyllomyces dendrorhous] - no data
mRNA_4904 13272 K00367 narB ferredoxin-nitrate reductase - cofit
mRNA_4905 13273 KOG2371 Molybdopterin biosynthesis protein + insig.
mRNA_4906 13274 K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2 - no data
mRNA_4907 13275 HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427 + no data

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