Gene info for mRNA_4907 in Rhodosporidium toruloides IFO0880

Name: 13275
Annotation: HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,274,592 to 1,274,946
See nucleotide sequence around mRNA_4907 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13270 and 13271 are separated by 118 nucleotides13271 and 13272 are separated by 143 nucleotides13272 and 13273 are separated by 292 nucleotides13273 and 13274 are separated by 58 nucleotides13274 and 13275 are separated by 288 nucleotides13275 and 13276 are separated by 281 nucleotides13276 and 13277 are separated by 495 nucleotides13277 and 13278 are separated by 350 nucleotides13278 and 13279 are separated by 300 nucleotides13279 and 13280 are separated by 59 nucleotides mRNA_4902: 13270 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,263,087 to 1,265,892 13270 mRNA_4903: 13271 - BLAST topoisomerase i [Xanthophyllomyces dendrorhous], at 1,266,011 to 1,266,275 13271 mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1,266,419 to 1,270,865 13272 mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1,271,158 to 1,273,410 13273 mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1,273,469 to 1,274,303 13274 mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1,274,592 to 1,274,946 13275 mRNA_4908: 13276 - K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type, at 1,275,228 to 1,281,484 13276 mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1,281,980 to 1,284,451 13277 mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1,284,802 to 1,288,001 13278 mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1,288,302 to 1,289,594 13279 mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1,289,654 to 1,291,365 13280
Locus Name Description Strand Phenotype
mRNA_4902 13270 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_4903 13271 BLAST topoisomerase i [Xanthophyllomyces dendrorhous] - no data
mRNA_4904 13272 K00367 narB ferredoxin-nitrate reductase - cofit
mRNA_4905 13273 KOG2371 Molybdopterin biosynthesis protein + insig.
mRNA_4906 13274 K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2 - no data
mRNA_4907 13275 HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427 + no data
mRNA_4908 13276 K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type - cofit
mRNA_4909 13277 KOG1339 Aspartyl protease + cofit
mRNA_4910 13278 K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13 - cofit
mRNA_4911 13279 BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro... + cofit
mRNA_4912 13280 KOG3309 Ferredoxin - cofit

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